PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0058s0185.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 123aa    MW: 13724.2 Da    PI: 4.5724
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0058s0185.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57356.76.9e-1864118256
               DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlve 56 
                          lfqrl+ e+Deiv+L+G++++ a +g +p+d++++fy+fvk+si+++v+  ql+ 
  Kaladp0058s0185.1.p  64 LFQRLFGEDDEIVVLKGMLEYSAGKGIDPMDELNGFYDFVKGSIHVDVTGAQLFH 118
                          79**************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.7E-1265119IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MAPKKPTLFE HPPRADASSN NKEEEEEEES DGSEEEEKPP RSQTKRLKKS TLPPVAEKNS  60
EKQLFQRLFG EDDEIVVLKG MLEYSAGKGI DPMDELNGFY DFVKGSIHVD VTGAQLFHRC  120
SA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007022191.15e-22PREDICTED: mediator-associated protein 1
RefseqXP_021288751.15e-22probable transcription factor At1g11510
TrEMBLA0A061F9M71e-20A0A061F9M7_THECC; DNA-binding storekeeper protein-related transcriptional regulator, putative
STRINGEOY137162e-21(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.14e-13DNA-binding storekeeper protein-related transcriptional regulator