PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0059s0147.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family FAR1
Protein Properties Length: 320aa    MW: 37996.8 Da    PI: 9.8109
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0059s0147.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1256.1e-084415290
                 FAR1 52 rrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                         +++r   rt C+ak+++  + +gkw v+k++ e nH+l+
  Kaladp0059s0147.1.p  4 KKRRRDVRTVCHAKMEIGHK-SGKWIVDKFSDEYNHPLT 41
                         6789999***********99.9***************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.8E-5441IPR004330FAR1 DNA binding domain
PfamPF105511.2E-26124217IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MNPKKRRRDV RTVCHAKMEI GHKSGKWIVD KFSDEYNHPL TSPNKVMKHQ SHRYYCKKLY  60
KVLRTQKKNN VRKECVAIIK HFQEKARKGD DFYFNIQIDS DGCLRNVFRA DERSRTSYLE  120
FGNVMVFDVI YRTNKFKMSF SPFDGVNHHR QSVLFGGALL DDETETTFVW LVEQFLKCMH  180
SKSLKTIIND KDIAICNAVK RVFSDAKHRF CVQHIKKHVI EHIQPFRMRY KDFADSYYQW  240
MKSKSPKEFE EGWEILNRKY EIGEKGCFPS MYKDREYLVK CYLKNIFFVG MTTSGRSESI  300
HLIFDGYVNS TTPLNEFVE*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021992177.11e-106protein FAR1-RELATED SEQUENCE 7-like
TrEMBLA0A2U1MT619e-85A0A2U1MT61_ARTAN; Protein FAR1-RELATED SEQUENCE 5
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-56FAR1-related sequence 5