PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0104.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BES1
Protein Properties Length: 310aa    MW: 33693.8 Da    PI: 9.2516
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0104.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822202.11.7e-6281473149
               DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 
                          + r pt+kErEnnkrRERrRRai+ kiyaGLRaqGny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+      g+sa++s +s
  Kaladp0060s0104.1.p   8 AARLPTAKERENNKRRERRRRAITGKIYAGLRAQGNYRLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGFKPP----PHGNSANISACS 93 
                          5799**********************************************************************....899********* PP

               DUF822  93 slqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
                          s q+s++ss++asp++sy+asp+ss++psp+++d ++++    llp+l  l++v++s
  Kaladp0060s0104.1.p  94 SKQHSPQSSNFASPMPSYHASPTSSAIPSPTRTDVNPSS---YLLPFLWDLAAVPAS 147
                          **********************************99885...788887777766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.0E-579128IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MTGSVSPAAR LPTAKERENN KRRERRRRAI TGKIYAGLRA QGNYRLPKHC DNNEVLKALC  60
AEAGWIVEED GTTYRKGFKP PPHGNSANIS ACSSKQHSPQ SSNFASPMPS YHASPTSSAI  120
PSPTRTDVNP SSYLLPFLWD LAAVPASLPP LRISNSAPVT PPVSSPTNKS QKRKPEWMEL  180
EFTKHPAKPD WMESLTKHPA FAASAPSSPS RRQGFNPTTI PECDESDVST VDSGRWAANL  240
TTAPSSPTFN LVQPVGQQGT TPRVGDGKFA RSSEFEFSSC RVKPWEGEII HEMGMDDLEL  300
TLGTAKAHC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-232982391444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-232982391444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-232982391444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-232982391444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006383241.11e-111BES1/BZR1 homolog protein 2
SwissprotQ94A437e-96BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA9PI051e-109A9PI05_POPTR; BES1 family protein
STRINGPOPTR_0005s12790.11e-110(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.26e-75BES1 family protein