PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0064s0170.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 221aa    MW: 24084.4 Da    PI: 11.0443
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0064s0170.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.74.9e-143380355
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         r+h e+E+rRRdriN  + +Lr+l+Pk+      K++Ka+ L ++++++k Lq
  Kaladp0064s0170.1.p 33 RSHTEAEKRRRDRINGHLLTLRKLVPKS-----DKMDKAALLARVIQHVKGLQ 80
                         78*************************8.....7*****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.72E-142284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.3263079IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-113380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-143382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.03E-103580No hitNo description
SMARTSM003533.6E-133685IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516718.734121198IPR002912ACT domain
CDDcd048733.95E-4123168No hitNo description
Gene3DG3DSA:3.30.70.2609.2E-5123169No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MLSRRDTVAR RTTRRWPASS KNGRAAAAAS SSRSHTEAEK RRRDRINGHL LTLRKLVPKS  60
DKMDKAALLA RVIQHVKGLQ GEAAEVGKAL TVPTDVDEVR ISTYAAAAES TSGSQTDIFM  120
EASLCCEDRP ELFAEIDQAL QSLNLSTARV EMGSLGGRVR IILLLSGNGI RNDSCSSQNR  180
MINLKGSLNV ALNRIVNSTP SVSSYRVTSK RQRFFLPSDT *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002272668.27e-62PREDICTED: transcription factor bHLH51
TrEMBLA0A2R6PLL61e-59A0A2R6PLL6_ACTCH; Transcription factor like
TrEMBLA0A438J2F15e-60A0A438J2F1_VITVI; Transcription factor bHLH51
STRINGVIT_13s0067g01350.t013e-60(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.15e-42bHLH family protein