PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0066s0081.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NF-YB

Protein Properties

Length: 267aa MW: 29784.9 Da PI: 4.0665

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0066s0081.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	28.7	3.2e-09	88	140	44	96
NF-YB 44 sfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 s +++ a++ c++ kr t n+dd+l a+ ++ f +++ pl++ l+ yr+ +++ Kaladp0066s0081.1.p 88 SSLSATANELCKESKRETTNADDVLKAIEEIDFPEFLGPLRASLEDYRQKNAK 140 667889******************************************97765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.20.10	3.3E-11	87	136	IPR009072	Histone-fold
SuperFamily	SSF47113	3.4E-14	88	175	IPR009072	Histone-fold

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence Send to blast
MMDNCTAYEG NNGKDRRDML FCSRLDHMEP QVKEEKLSQC SDAGDISLHK DALLAFYKSA 60 RVFIHYLSAA GMATMRGARF SYDSVELSSL SATANELCKE SKRETTNADD VLKAIEEIDF 120 PEFLGPLRAS LEDYRQKNAK KRAGAAKAKE VNKKRKKEDM PPEDERNEVE FTINNDADSA 180 NDQEHQNDAD EEGNKEAENE LQDDVDKEGI QAEDKVDEND QHDASDAIAV EEEDDDSIRS 240 NEQQNDADGE GNSINDDDEE DGANEA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	156	KKRAGAAKAKEVNKKRKK
2	152	156	KKRKK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2I0I9N0	5e-40	A0A2I0I9N0_PUNGR; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	2e-27	nuclear factor Y, subunit B11

Link Out ? help Back to Top
Phytozome	Kaladp0066s0081.1.p