PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0073s0049.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 174aa    MW: 18827.3 Da    PI: 10.572
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0073s0049.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.61.7e-0911421953
                  AP2 19 IrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                         Irdp   g++ r++lg+f+tae+A +a++aa++++
  Kaladp0073s0049.1.p 11 IRDP---GRKSRVWLGTFDTAEDATRAYDAAALEF 42
                         6776...456**********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.128155IPR001471AP2/ERF domain
SMARTSM003802.5E-6661IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-141143IPR001471AP2/ERF domain
CDDcd000184.43E-131142No hitNo description
SuperFamilySSF541719.15E-91142IPR016177DNA-binding domain
PfamPF008478.4E-51641IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MAAEEVRFRG IRDPGRKSRV WLGTFDTAED ATRAYDAAAL EFSLTGATAK SLTTPARAAP  60
SNPARRRLVS NWGRRSALTA SSFSFSRCCL RTKAIIFQFD AALGSKNQPL SSNPLPIRPK  120
ATHVYTKPFQ FESPASDTDS SSAMIDLGVN EDPDVKPKRG LQGIDLNLPP TKL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-