PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0074s0015.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 217aa MW: 23807.3 Da PI: 6.6538

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0074s0015.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	114.6	4.1e-36	12	65	7	60
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +c rC stntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rk ++ Kaladp0074s0015.1.p 12 HCQRCGSTNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKTRR 65 7**************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-24	4	65	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.652	11	65	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.2E-30	12	65	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	13	49	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MERSEGVDVS PHCQRCGSTN TKFCYYNNYS LTQPRYFCKG CRRYWTKGGS LRNVPVGGGC 60 RKTRRGRSTS ASRYHHHHRS PSTANMGSTS LAASSFTDDS SSTGQAVDLA AVYANFLKQE 120 PTQELEPANE VLTGPIGYQA MTTRCAEMGR IDSNRVVPFE LPPLPNEEGL WFSQAADWFG 180 SQLVGSNEPP SIDVFNQDSG DGDQLVASWS PFDFPI*

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00405	DAP	Transfer from AT3G52440	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028784903.1	6e-48	dof zinc finger protein DOF3.5-like
Refseq	XP_028787723.1	7e-48	dof zinc finger protein DOF3.5-like
TrEMBL	A0A4D9B7U3	2e-44	A0A4D9B7U3_SALSN; Uncharacterized protein
TrEMBL	W9S694	2e-44	W9S694_9ROSA; Dof zinc finger protein
STRING	XP_010106991.1	3e-45	(Morus notabilis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	2e-47	Dof family protein

Link Out ? help Back to Top
Phytozome	Kaladp0074s0015.1.p