PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0076s0205.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TALE
Protein Properties Length: 615aa    MW: 67915.5 Da    PI: 6.4041
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0076s0205.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.74.6e-094244611954
                          HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
             Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                          Fe   ++yp+++e+  LA+++gLt  qV +WF N R +
  Kaladp0076s0205.1.p 424 FEHflHPYPKESEKVMLARQTGLTRGQVANWFINARVR 461
                          664559******************************88 PP
2BELL123.77.2e-40288358272
                 BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                          rqelq+kk+kL+s+leeVd+r++qy++q+++++ssF+ vag g+akpYt+lAl++iSrhFrcL+dai++qi
  Kaladp0076s0205.1.p 288 RQELQNKKSKLMSMLEEVDRRFSQYYHQMHVIVSSFDLVAGSGAAKPYTKLALQTISRHFRCLRDAIVGQI 358
                          79********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005744.6E-51212356IPR006563POX domain
PfamPF075261.3E-48218355IPR006563POX domain
PROSITE profilePS5007112.212402465IPR001356Homeobox domain
SMARTSM003891.2E-8405469IPR001356Homeobox domain
CDDcd000869.31E-12405466No hitNo description
SuperFamilySSF466892.48E-17406472IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-27408471IPR009057Homeodomain-like
PfamPF059209.7E-17422461IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    Send to blast
MAIYYPSSTD QRDASATPFL QEPPSSTSYN ELSIPPGNMM MYINQGAPSS SYMEFMSEHS  60
LSQHDCVDMA TVPGGGNGLM NIPTSGALQT SSATGNPYSD SVDEASRKIP GMELNMLNGD  120
QNVHTQGLSL SLSTEIQSGM AASSHYQYSS SGLVSFSHLP MSAEGATPSN YLQLPAEFSA  180
DYGHIFKHEV LYSPQLSMGH KQNQYDPNMY NSFHTKTICD SRFLKAAQQL LDEVVSVQDA  240
LKKPEMDKNR TPHQTVGDSS KEGGQKSSEN ATTGQNEASS NELSLTVRQE LQNKKSKLMS  300
MLEEVDRRFS QYYHQMHVIV SSFDLVAGSG AAKPYTKLAL QTISRHFRCL RDAIVGQIQV  360
TRRSLGEQDT SPNLLGGGIP RLRYVDQQIR QQRGLHQLGV SRHSWRPQRG LPESSVTILR  420
AWLFEHFLHP YPKESEKVML ARQTGLTRGQ VANWFINARV RLWKPMVEEM YKEEFGESET  480
ISMSSPDRCL SNARKSVSSW ASIDAADEEL QRNLMSLASA GSHPHKFSES TSKPDFTASV  540
ESTGPLADFF RNRSHGDDDL GFGLMKFEGD RRHNALDHGL YHSEISSLNQ DGDGNSLAQD  600
SQVSLGLGVT GTRP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A1e-16411468158Homeobox protein Meis1
4xrs_B1e-16411468158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023903260.11e-155BEL1-like homeodomain protein 7 isoform X1
RefseqXP_023903261.11e-155BEL1-like homeodomain protein 7 isoform X1
RefseqXP_023903262.11e-155BEL1-like homeodomain protein 7 isoform X1
TrEMBLA0A2N9IHG61e-171A0A2N9IHG6_FAGSY; Uncharacterized protein
STRINGVIT_18s0001g13150.t011e-155(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-114BEL1-like homeodomain 7