PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0076s0345.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 451aa    MW: 50098 Da    PI: 7.8245
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0076s0345.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix52.71.1e-1618109187
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                          +W+++ + +L++a  ++  +l+rg+l++++W+ev++++     ++++  r+ +qCk++++ ++k+yk +k++++  +  ++s++p+fd+l
  Kaladp0076s0345.1.p  18 CWSEEATSTLVDAWGRRYVELSRGNLRQKDWQEVADAVnarhgHSKKTFRTDVQCKNRIDTIKKKYKTEKARASATNGAVVSSWPFFDRL 107
                          7*************************************988877778889*************************9999**********9 PP

             trihelix  86 ea 87 
                          +a
  Kaladp0076s0345.1.p 108 DA 109
                          85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.4E-2616110No hitNo description
PROSITE profilePS5001115.213112450IPR000719Protein kinase domain
SMARTSM002204.9E-7215450IPR000719Protein kinase domain
Gene3DG3DSA:1.10.510.101.3E-31312450No hitNo description
SuperFamilySSF561122.82E-34316450IPR011009Protein kinase-like domain
PfamPF000694.2E-22316450IPR000719Protein kinase domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MDESSPPPSR PIPVREDCWS EEATSTLVDA WGRRYVELSR GNLRQKDWQE VADAVNARHG  60
HSKKTFRTDV QCKNRIDTIK KKYKTEKARA SATNGAVVSS WPFFDRLDAL IGPNVKKVGS  120
GGGGGQVVMR IASPPMALPL TAYRKAVQPR TSPPMATVTP VTLPKKRGAA AASMDDSYFR  180
RNYSAVAAAA AAAEVDEQEE EESEERMAEE EDSSRSSGDG EGDGDGIKKL ARAIKRFGEI  240
YARVEGEKQR QMVELEKQRM QFAKELEVQR MQMFMNTQVQ LEKIKRSKGS GSNDMSGLVS  300
VSSMPDIPNY LTSLFLVDPQ THEVKLCDFG SAKVLIKGEL NISYICSRFY RAPELIFGAT  360
DYTTSVDLWS AGCVLGELLL GQELFPGDTS VDQLVKIIQV LGTPTREEIR CMNPTYTDHK  420
FPTIKAHPWH KVFDKRVPPE AIDLISRLLQ *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4afj_A8e-68315450161296GLYCOGEN SYNTHASE KINASE-3 BETA
4afj_B8e-68315450161296GLYCOGEN SYNTHASE KINASE-3 BETA
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010655524.11e-110PREDICTED: trihelix transcription factor ASIL1 isoform X3
TrEMBLA0A438D8U01e-108A0A438D8U0_VITVI; Trihelix transcription factor ASIL2
TrEMBLA5ANU51e-108A5ANU5_VITVI; Uncharacterized protein
TrEMBLF6HM981e-108F6HM98_VITVI; Uncharacterized protein
STRINGVIT_10s0003g01300.t011e-109(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-63sequence-specific DNA binding transcription factors