PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0079s0066.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 427aa    MW: 47461 Da    PI: 5.9921
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0079s0066.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573115.43.5e-36192287297
               DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                          lfqrl+se+Dei++L+G++++ ak+g +p+dd+++f++fvk+s++++v+  q++ Ki+rLKkK++++ +++k+g +++fsk+h+q +++l
  Kaladp0079s0066.1.p 192 LFQRLFSEDDEIAVLKGMLEYSAKNGIDPMDDLNGFHDFVKGSMHVDVTGAQFIHKIKRLKKKYENNARRSKEGVDKTFSKPHEQMSYDL 281
                          79**************************************************************************************** PP

               DUF573  92 skkiWg 97 
                          skkiWg
  Kaladp0079s0066.1.p 282 SKKIWG 287
                          *****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045048.0E-32193287IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MAPKKPTPFE HPPRVDSSSD EEEEEEEEEE DSGGSEKEEE TPQSQPVIAK KATLPPVAEK  60
NPALSKKPEL KPEESSSDED GSDSDSGSDS EVTPPAADPS VKPISSNPAE DSPKVLRKSK  120
LKKPDASPVP PSAASVTKLA GKRPPEGKGD GKNPKKSKKV AEVEDRQVVE ESKKPATDEE  180
VKKTGEDSKK QLFQRLFSED DEIAVLKGML EYSAKNGIDP MDDLNGFHDF VKGSMHVDVT  240
GAQFIHKIKR LKKKYENNAR RSKEGVDKTF SKPHEQMSYD LSKKIWGFEN AKAASASNGG  300
FELKANGKGK RTPKPNMTPD QKEKHASTLQ FPKDIRVRSE QEHARQNRAS SFCFTELMRS  360
KDAVGMGFSE ELFKRGLELL ADEEKARLEE RWKNLLVAEA ELYYQRLELI RDQVKLTLDA  420
YKNSAH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.14e-32DNA-binding storekeeper protein-related transcriptional regulator