PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0089s0011.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 433aa MW: 45798.8 Da PI: 10.249

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0089s0011.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.5	9.4e-16	356	408	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+aeN++L+ + e l k+ + Kaladp0089s0011.1.p 356 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKAENQELQRKQEVLMKLQD 408 79***************************************999998888765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-15	352	416	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.45	354	405	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.2E-13	356	408	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.44E-11	356	405	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.4E-15	356	404	No hit	No description
CDD	cd14707	1.75E-27	356	410	No hit	No description
PROSITE pattern	PS00036	0	359	374	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence Send to blast
MGTDLNFGGF GRAGGGGGGS APVGRQTSVY SLTLDELQSS VGGSLGKDFG SMNMDELLKN 60 IWTAEEMQTM TTSCSGAAQM SVGASSGGGL QKQGSLTLPR TLSQKTVGEV WKDVHKEYGA 120 GKDGTWTSVT GLQQRQQSLK EITLEEFLVR AGVVREDLNV YTLQALANSS NNGGPLYSDH 180 LKENTNKGTS GHGIGFPSAA QGLGLTNQVP GAGNQIHVQA PILPLNVNGA RSSQQPVLSP 240 QTQKKPQLFP KLPGAPGYTG QMDGGVQLAS PRIRGGLVGM PVNTTSMVQG SGMGMVGLGT 300 ASMNMVNESS PNQLSSDGAG KSNGGDLTSV SPVPYMFSGG IRGRRVNGAM EKVVERRQRR 360 MIKNRESAAR SRARKQAYTM ELEAEVAKLK AENQELQRKQ EVLMKLQDSQ VMESMPPGPK 420 RQCLRRVQSS PW*

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence Send to blast

MGTDLNFGGF GRAGGGGGGS APVGRQTSVY SLTLDELQSS VGGSLGKDFG SMNMDELLKN  60
IWTAEEMQTM TTSCSGAAQM SVGASSGGGL QKQGSLTLPR TLSQKTVGEV WKDVHKEYGA  120
GKDGTWTSVT GLQQRQQSLK EITLEEFLVR AGVVREDLNV YTLQALANSS NNGGPLYSDH  180
LKENTNKGTS GHGIGFPSAA QGLGLTNQVP GAGNQIHVQA PILPLNVNGA RSSQQPVLSP  240
QTQKKPQLFP KLPGAPGYTG QMDGGVQLAS PRIRGGLVGM PVNTTSMVQG SGMGMVGLGT  300
ASMNMVNESS PNQLSSDGAG KSNGGDLTSV SPVPYMFSGG IRGRRVNGAM EKVVERRQRR  360
MIKNRESAAR SRARKQAYTM ELEAEVAKLK AENQELQRKQ EVLMKLQDSQ VMESMPPGPK  420
RQCLRRVQSS PW*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028806847.1	1e-133	bZIP transcription factor TRAB1-like
Swissprot	Q9M7Q4	1e-100	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A061FIW7	1e-126	A0A061FIW7_THECC; Abscisic acid responsive elements-binding factor 2 isoform 1
STRING	EOY14438	1e-127	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	8e-83	abscisic acid responsive elements-binding factor 2

Link Out ? help Back to Top
Phytozome	Kaladp0089s0011.1.p

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]