PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0092s0211.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 208aa    MW: 23077 Da    PI: 6.4191
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0092s0211.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.7e-162068355
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         y+GVr ++ +g+Wv+eIr p++   r r++lg+f  ae+Aa+a++ a ++++g
  Kaladp0092s0211.1.p 20 YRGVRMRS-WGKWVSEIRQPRK---RSRVWLGTFPNAEMAARAHDVASLAFKG 68
                         9****998.**********954...5*******************99888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.4E-111867IPR001471AP2/ERF domain
PROSITE profilePS5103222.8271976IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-201977IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.2E-311977IPR001471AP2/ERF domain
SMARTSM003804.1E-361982IPR001471AP2/ERF domain
CDDcd000187.79E-302078No hitNo description
PRINTSPR003673.9E-102031IPR001471AP2/ERF domain
PRINTSPR003673.9E-104258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MAEYVSNLRA KEERRGAPAY RGVRMRSWGK WVSEIRQPRK RSRVWLGTFP NAEMAARAHD  60
VASLAFKGKS AHLNFPHLVP HLPQPASLLP SHIRAAASKA AAMTHLTSCP PTQVKPADDH  120
SPAEAVMSWS ADQEAQQGSY WNEMGSELVE LPSLAGSEAL QSCVWDELRI MDSGGWWVWE  180
DMHDIDRFGY LNEAIGSVVV DEDHTGF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1620771573Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.11e-38ERF family protein