PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0094s0103.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 355aa    MW: 40385.1 Da    PI: 9.5488
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0094s0103.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.14e-135196550
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                         k  rr+++NReAAr+sR+RKka+i++Le+   +L +  ++L    +
  Kaladp0094s0103.1.p 51 KTLRRLAQNREAARKSRLRKKAYIQQLETSRIKLVQLEQELHRSRS 96
                         7789************************865555555544443333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.6E-947111IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.0E-949107No hitNo description
PROSITE profilePS502178.9564993IPR004827Basic-leucine zipper domain
PfamPF001705.7E-1051103IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.73E-851107No hitNo description
PROSITE patternPS0003605469IPR004827Basic-leucine zipper domain
PfamPF141449.4E-27154226IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MRPPTLNIFP SLPMHQDQTS TLKHEENRQK LPRGLTSSSE QEGRLKIPDP KTLRRLAQNR  60
EAARKSRLRK KAYIQQLETS RIKLVQLEQE LHRSRSTHMN MHQNIHSLLQ GSSFSGGVVG  120
GHPNLSMGLN LSSDAVVYDM EYGRWLEEHH KLTCELRAAF VEQLHENELS LYVNNWLAHF  180
DQLIHLKSMV AKTDSFHLIS GAWKSPAERC FLWIGGFRPS QIIKIILKQI EPLSDNQLMG  240
IYGLQNSTQE GEEALSNGLE SLSQSLSNTI ASDSLTSPPN DMSNYMGQMA IAINKLSTLE  300
GFVRQADNLR QQTIHRLLQV LTVRQTARCF LTISEYFHSL RALSSLWLAR PRQE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027350993.11e-169bZIP transcription factor TGA10-like
SwissprotQ52MZ21e-158TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A498HYB51e-163A0A498HYB5_MALDO; Uncharacterized protein
STRINGXP_009357109.11e-165(Pyrus x bretschneideri)
STRINGXP_009370244.11e-167(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.11e-131bZIP family protein