PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0195.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 90aa    MW: 9894.33 Da    PI: 8.0315
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0195.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.8e-051262354
                         HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                         +  +++ r+ ++ + ++++ L++l+P+    ++s   +    L+++ +YI  L
  Kaladp0095s0195.1.p 12 KRRPAAARNSVKPLSEKLQALQSLIPEqE--TTSAEINADKLLRETADYILLL 62
                         455778888888899************55..899999999**********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.15E-7776IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.172962IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.8E-52266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MNPKVKPSSA RKRRPAAARN SVKPLSEKLQ ALQSLIPEQE TTSAEINADK LLRETADYIL  60
LLETRVSVLQ GLIRFYEAAE CTTEDCSCS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-