PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0687.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 279aa MW: 30486.9 Da PI: 9.6823

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0687.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	84.1	1.4e-26	16	60	7	51
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPv 51 + rC s++tkfCy+nny+++qPryfC++C+ yWt GG++rn+ v Kaladp0095s0687.1.p 16 RTMRCASMDTKFCYFNNYNVNQPRYFCRKCQMYWTSGGTMRNLLV 60 567***************************************866 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	20.113	15	69	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	7.7E-23	18	59	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-15	19	62	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MLTWKRVVAA GCTINRTMRC ASMDTKFCYF NNYNVNQPRY FCRKCQMYWT SGGTMRNLLV 60 VALNGSVLSF VPQVPLPKAV DRASCLNGPC KLKKLKIASS RRTVIVVDDS RSWSAGSGSN 120 IENEGEAQAA GGYQSFQPHM MLFPAPLWPP FPWNPAQYNY PLPSPINYRA GFPGPFYPMY 180 TGCAAPRALN APLSVHRSPL SLQSEPKPPT LGKHLRDDND NAAEPGNIDT AAETERSRPL 240 SSTSSALLAN PAALSRSMNL HERMIGKPGF VQASELAA*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022774500.1	9e-38	cyclic dof factor 2-like isoform X2
STRING	EOY03487	5e-36	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.2	4e-20	cycling DOF factor 2

Link Out ? help Back to Top
Phytozome	Kaladp0095s0687.1.p