PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0774.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 550aa MW: 59401.3 Da PI: 7.1861

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0774.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.8	1.5e-30	231	290	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+a+d ++++itYeg+Hnh+ Kaladp0095s0774.1.p 231 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaACPVRKQVQRCADDMSILIITYEGTHNHP 290 58*************************99**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	2.6E-31	217	292	IPR003657	WRKY domain
SuperFamily	SSF118290	1.96E-27	224	292	IPR003657	WRKY domain
PROSITE profile	PS50811	28.369	226	292	IPR003657	WRKY domain
SMART	SM00774	3.1E-36	231	291	IPR003657	WRKY domain
Pfam	PF03106	6.1E-27	232	290	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0006952	Biological Process	defense response
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence Send to blast
MEGYNASLER ASGGGRAMED SVELSSTDSD GDRACNLQSV TSKDAQLQSA KIEMGEVRKE 60 NERLRLHLDK MIKDYQALQK QVQDIENAEL PSTSPDFNQA TAASDSRQEF EEENELVSLS 120 LGRTASIDLK RSKVIQGNES DSLALGLEDF KVFEEPKSDA PVENLAVQGH EIIRSSSEET 180 TREELAAASS WPPQKVSKRS SEDNNEPSSY PRSSGKRARV CLRIRCETPT MNDGCQWRKY 240 GQKIAKGNPC PRAYYRCTVA AACPVRKQVQ RCADDMSILI ITYEGTHNHP LPISATGLAS 300 TTSAAASMLL SGSSSTVANP TTSRPSHSFS AIPNKHIFQQ QYQLPTSGSS FNPNSHHQTI 360 TLDLTSSNNA ATSSQHSPHF NLFSRSSSMS YPTHQYSSRP RPTSLSFSSS SPANPPSWAN 420 NNKMLYSSST SMSQFSTSTL DYSHFYQSTK QRNSNNPASN SNSTSPPVTE SAITAALTSD 480 PSFQSALAAA LTTIIGGRVV PNFGSSSTNA QRAGSSSLML GQAHLPIQPD ALAKSTSTSP 540 KDNVKEHSS*

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence Send to blast

MEGYNASLER ASGGGRAMED SVELSSTDSD GDRACNLQSV TSKDAQLQSA KIEMGEVRKE  60
NERLRLHLDK MIKDYQALQK QVQDIENAEL PSTSPDFNQA TAASDSRQEF EEENELVSLS  120
LGRTASIDLK RSKVIQGNES DSLALGLEDF KVFEEPKSDA PVENLAVQGH EIIRSSSEET  180
TREELAAASS WPPQKVSKRS SEDNNEPSSY PRSSGKRARV CLRIRCETPT MNDGCQWRKY  240
GQKIAKGNPC PRAYYRCTVA AACPVRKQVQ RCADDMSILI ITYEGTHNHP LPISATGLAS  300
TTSAAASMLL SGSSSTVANP TTSRPSHSFS AIPNKHIFQQ QYQLPTSGSS FNPNSHHQTI  360
TLDLTSSNNA ATSSQHSPHF NLFSRSSSMS YPTHQYSSRP RPTSLSFSSS SPANPPSWAN  420
NNKMLYSSST SMSQFSTSTL DYSHFYQSTK QRNSNNPASN SNSTSPPVTE SAITAALTSD  480
PSFQSALAAA LTTIIGGRVV PNFGSSSTNA QRAGSSSLML GQAHLPIQPD ALAKSTSTSP  540
KDNVKEHSS*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2ayd_A	5e-18	218	292	1	74	WRKY transcription factor 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	6e-58	WRKY DNA-binding protein 72

Link Out ? help Back to Top
Phytozome	Kaladp0095s0774.1.p