PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0100s0009.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 436aa    MW: 46928.2 Da    PI: 8.9405
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0100s0009.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.3e-05205227223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                           Cp Cg++F+  ++L++H+ + H
  Kaladp0100s0009.1.p 205 ACPQCGEVFPKIESLEHHQAVrH 227
                          6******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.808204232IPR007087Zinc finger, C2H2
PROSITE patternPS000280204227IPR007087Zinc finger, C2H2
SuperFamilySSF563991.73E-23229433No hitNo description
Gene3DG3DSA:3.90.228.102.2E-14231433IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MISLLSSNEA CSFIIFTFSE LHSPHLLALF FFMALFTFQQ PAPKPNTNKK KWEKEKQNQQ  60
QPPLSSSWHQ IKNLLHCKQT QVILPASGPA KAPVEKQSGS SKNNNGSSNY SCKSICRFGD  120
VVHGNTRVVH RADNSPEGGS AGKESGPKKI NGSARRVVGS GSVRSVGGGS CGPSGLQFRK  180
LSGCYECHTV VDPSRYPVPR GTVCACPQCG EVFPKIESLE HHQAVRHAVS ELGPEDSGRN  240
IVEIIFKSSW LKKDTPICKI ERILKVHNTN RTIQRFEDCR DAIKLRASAS AKKNPRCAAD  300
GNELLRFHCT TLSCALGSRN SSSLCAAIPG CNICTLIRHG FRPSDGGGGV FTAAGSGRAH  360
DGVEENEGQR AMIVCRVVAG RVRREGTAEP EEGGGGSGFD SVAGRAGSYS DLEELTVFNP  420
RAILPCFVVI YKSTE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104443.11e-169uncharacterized protein LOC21399114
TrEMBLA0A2P5F7Z41e-171A0A2P5F7Z4_TREOI; Zinc finger, C2H2 domain containing protein
STRINGXP_010104443.11e-168(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-128C2H2-like zinc finger protein