PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0607s0008.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 348aa    MW: 37969.9 Da    PI: 5.9087
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0607s0008.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.6e-13161208355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          + h  +Er RR+++N++f  L  l+P++     kK++Ka++L  A +Y+k+Lq
  Kaladp0607s0008.1.p 161 QDHVVAERMRREKLNQRFIALSALVPSL-----KKMDKASVLAGAAKYLKELQ 208
                          56999***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.831158207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-10162208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-17162220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.77E-13163212No hitNo description
SuperFamilySSF474591.83E-16163224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-14164213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MEHLPSAGGW ISEMGIDEDS AQIYDHINLL TDSVTEFKFP SSPAPSWEDE KPLKSCHLPK  60
ECNDSASWTD AKIQTCESIR KPKLEPVSSS SFSQIISFGN SGKSDESLYA GGLNDIVQRS  120
GEATYGHICE SNKPALRRQN NYLTSTGSGR TERMITSFGQ QDHVVAERMR REKLNQRFIA  180
LSALVPSLKK MDKASVLAGA AKYLKELQER VKALEEKTAQ KEVEPVMSVK KSRLSFTDET  240
SSTDESSETE QLSSDCSLPE IEARICGESV LIKIHCESSP GLAGNILVEV EKLKLAVVSS  300
HTVPFGTHST DITIVAKMEV GCSSAPKELV RSLRQAVLKA MQATITA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018817560.16e-65PREDICTED: transcription factor bHLH18-like isoform X2
TrEMBLA0A2I4EDT91e-63A0A2I4EDT9_JUGRE; transcription factor bHLH18-like isoform X2
STRINGXP_010105102.13e-62(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-38bHLH family protein