PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0674s0117.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 200aa    MW: 21809.7 Da    PI: 8.7194
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0674s0117.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-132468347
                         SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         +W++eE++ ++ + k+ G+g+W+ I++ + k Rt+ q+ s+ qky
  Kaladp0674s0117.1.p 24 PWSEEEHKCFLTGLKKVGKGDWRGISKNFVKSRTPTQVASHAQKY 68
                         8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.9981773IPR017930Myb domain
SMARTSM007176.5E-102171IPR001005SANT/Myb domain
SuperFamilySSF466892.09E-152373IPR009057Homeodomain-like
TIGRFAMsTIGR015577.9E-162371IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.607.2E-112367IPR009057Homeodomain-like
PfamPF002495.3E-112468IPR001005SANT/Myb domain
CDDcd001671.63E-92469No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MIMIVSFVYC WDVCYVGFIC AGTPWSEEEH KCFLTGLKKV GKGDWRGISK NFVKSRTPTQ  60
VASHAQKYFL RHNTVKHRRR TSLFDITAET VSGQPTEELC EATLRDSASS QIHSPATNSP  120
NAVVQPLVDP SSVLTQHPLL IHPSPPPALQ SVPSPNSSSP ANYSLNLSLS LSSYSQTSPY  180
RALQTTPGLT TKDSYISVA*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001281003.13e-37transcription factor MYB1R1-like
TrEMBLD9ZJ868e-36D9ZJ86_MALDO; MYBR domain class transcription factor
STRINGXP_008374494.11e-36(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.13e-30MYB_related family protein