PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp1201s0015.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 402aa MW: 44402 Da PI: 7.8112

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp1201s0015.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.3	1.1e-15	201	253	3	55
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L eN +L k+l ++++ Kaladp1201s0015.1.p 201 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENCSLTKRLTDISQK 253 689*****************************************998877765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.9E-12	198	255	No hit	No description
SMART	SM00338	2.0E-16	199	263	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.369	201	255	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.1E-14	202	252	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.9E-11	203	252	No hit	No description
PROSITE pattern	PS00036	0	206	221	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	1.7E-32	270	397	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence Send to blast
MDRVFSMEGM VEQLWTPSQL DSVNASPSSK TKLNRSSSEW AFQLFIQENS TSDHSPAAKQ 60 EEHYDDDDVV EIKDQRAAPL NLPIDSDEYQ AFLKTRLDLA CAAVAMTRQA SIGKPQDSST 120 STDSGSKASQ VHSQLNRKGS TFESSKQKNR NEPLGNSSLQ AKPGKPVVRV KSTTSGSSRE 180 LSDDDELEGD TEITGDIDHT DAKRVRRMLS NRESARRSRR RKQAHLTELE TQVAQLRVEN 240 CSLTKRLTDI SQKFNDAAVD NRVLKADVET LRAKVKMAEE TVKRVTGQSP MSQTMSETST 300 FSYDWNASDI STDAAVPIQD DRTHHISQQH ILNPLAATDR LDPRVTHSLS NNPTTKNIHP 360 NTSAAVPITS SGNKVGRTSS MQRVASLEHL QKRIRGNSSA N*

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence Send to blast

MDRVFSMEGM VEQLWTPSQL DSVNASPSSK TKLNRSSSEW AFQLFIQENS TSDHSPAAKQ  60
EEHYDDDDVV EIKDQRAAPL NLPIDSDEYQ AFLKTRLDLA CAAVAMTRQA SIGKPQDSST  120
STDSGSKASQ VHSQLNRKGS TFESSKQKNR NEPLGNSSLQ AKPGKPVVRV KSTTSGSSRE  180
LSDDDELEGD TEITGDIDHT DAKRVRRMLS NRESARRSRR RKQAHLTELE TQVAQLRVEN  240
CSLTKRLTDI SQKFNDAAVD NRVLKADVET LRAKVKMAEE TVKRVTGQSP MSQTMSETST  300
FSYDWNASDI STDAAVPIQD DRTHHISQQH ILNPLAATDR LDPRVTHSLS NNPTTKNIHP  360
NTSAAVPITS SGNKVGRTSS MQRVASLEHL QKRIRGNSSA N*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	215	222	RRSRRRKQ
2	217	222	SRRRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009787496.1	1e-122	PREDICTED: light-inducible protein CPRF2-like
Refseq	XP_016450151.1	1e-122	PREDICTED: light-inducible protein CPRF2-like
Swissprot	Q99090	1e-106	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A1S3YD35	1e-121	A0A1S3YD35_TOBAC; light-inducible protein CPRF2-like
TrEMBL	A0A1U7XCW9	1e-121	A0A1U7XCW9_NICSY; light-inducible protein CPRF2-like
STRING	XP_009787496.1	1e-122	(Nicotiana sylvestris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	9e-66	bZIP family protein

Link Out ? help Back to Top
Phytozome	Kaladp1201s0015.1.p

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]