PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0002s0037.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NZZ/SPL
Protein Properties Length: 303aa    MW: 32912.5 Da    PI: 9.4231
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0002s0037.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE30.95.5e-103317838182
               NOZZLE  38 e.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlpvpvdrgvvlqgfps......... 117
                          e +k  rgrkp        +kkp+ rgmgv +ler +++e+       +     + aa +    ++  p  + ++    ps         
  Kalax.0002s0037.1.p  33 EhPKLPRGRKPTKSNKSPMKKKPSQRGMGVERLERLRLQEKW---GGGGSSLPEAAAALPAHLHQFQPPPHP-LIPVAAPSpaahfgpql 118
                          547889******999999*******************98754...333333444458889998888745444.44455566668777766 PP

               NOZZLE 118 .slgs..srilcggvgsgqvmidpvispwgfvetsatthelssisnpqmynassnnrcdtcfkkkrld 182
                            +     ril gg   g +m    +   g++ets   +elssi++  ++     ++cd+c  k++  
  Kalax.0002s0037.1.p 119 lNMADpkVRILGGG-SCGSLMARGWVG--GLLETSR--KELSSIPK--LMP-CHHHQCDACCSKNKCH 178
                          63443446666555.578999887764..9*****9..9*****65..554.56677****9987754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF087449.4E-931178IPR014855Plant transcription factor NOZZLE
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MASPSPLLMI VSQGSTKPQP GSSNQDYSSP KSEHPKLPRG RKPTKSNKSP MKKKPSQRGM  60
GVERLERLRL QEKWGGGGSS LPEAAAALPA HLHQFQPPPH PLIPVAAPSP AAHFGPQLLN  120
MADPKVRILG GGSCGSLMAR GWVGGLLETS RKELSSIPKL MPCHHHQCDA CCSKNKCHHA  180
LTGLHSNHGH AVGLEMKDFN GITMRQIYHH VNKQEAEMMG VTRLASGLKE YEFFPSEKGL  240
KEIEFFPGIC TSDSHTDSFT RSFEQQSHHT STESASYYSI PSHQYTTTAA SNAIDLSLKL  300
SL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-