PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0003s0253.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 553aa    MW: 60460 Da    PI: 7.774
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0003s0253.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.71.9e-11422482363
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          ++kr++r   NR +A+rs +RK  +i eLe kv++L++e ++L  ++  l+ e+a l s++
  Kalax.0003s0253.1.p 422 DSKRAKRILANRQSATRSKERKMRYISELEHKVQTLQTEATTLSAQVTVLQRESAGLSSQN 482
                          68****************************************************9999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-17420484IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.208422485IPR004827Basic-leucine zipper domain
PfamPF001702.3E-10423482IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.34E-11424476No hitNo description
Gene3DG3DSA:1.20.5.1705.9E-12424481No hitNo description
CDDcd147033.96E-23425476No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MGDAGKAGNE TMQRVQSSFG TVHSSLPEQT MSLNHQLELT HLSTALNVAP LQHFGQGFGV  60
DHGKRALVSP SNNGQIPPLS TYSHIPVRRP SVLSMGSQSF VQSPSHSRSI SQPPVFNLDS  120
LPPLSPSPFW DSTPNANQLS VDVNMEDRDA RSHLLPPSPY TRTNGATRPG ESLPPRKAHR  180
RSNSDIPFGF SMVMQSSPPL LPLKGPITLE RSASDRENFG GTSQSITRTS RNKVIDYNGE  240
GTGERKSEGE VIDDLFNAYM KLDGTGVTKP AVNGEKNSNS HHEDLDSQAS GSKTNAGENS  300
DNEAESCINE SGNGVVKAGT HGSGCTERRE GIKRSAVGDI APTARHYRSI SMDSFMSNMH  360
FEEELPKLPA SPGPRAGEMS SSNLFDKNSN TFCLEFGNGE FRGLELKKIM ANEKLAEIAL  420
ADSKRAKRIL ANRQSATRSK ERKMRYISEL EHKVQTLQTE ATTLSAQVTV LQRESAGLSS  480
QNNELRFRLQ AMEQRVQLCN ALNEALSAEV QRFKLATQEL SNNPQMFQQQ SYQFNSSQAQ  540
QNNMSSKHDS TN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023883422.10.0transcription factor RF2a
TrEMBLA0A2N9G6H50.0A0A2N9G6H5_FAGSY; Uncharacterized protein
STRINGEOX978370.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-132bZIP family protein