PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0006s0201.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 254aa    MW: 28240 Da    PI: 10.1692
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0006s0201.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.56.7e-14171231363
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          + kr+rr++kNRe+A rsR+RK++ + +Le  + +Le+eN+ L ke    +ke  kl +e+
  Kalax.0006s0201.1.p 171 AQKRQRRMIKNRESAARSRERKQEHQVKLESLASKLEEENDHLMKEKAAQTKERLKLLMEK 231
                          78*******************************************9999999999998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-13165227No hitNo description
SMARTSM003382.4E-12169233IPR004827Basic-leucine zipper domain
PfamPF001703.0E-12170230IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.921171227IPR004827Basic-leucine zipper domain
CDDcd147077.94E-14173215No hitNo description
SuperFamilySSF579594.82E-10173227No hitNo description
PROSITE patternPS000360176191IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MASLTNMMTA SSTTTINSDL PRRTASSDHN TKSANESDDV PEDTTSRQAS KRRTVEDVWK  60
GIVAGEKVCK VEVPDDMMTL EDFLVRAGAV DREEVVDDHV KVRVPLSASV SAGLGTMTSR  120
LLSFDSINLS PFPSGGGSSI YGSGIAFTDS GGLGRRNVRG SCVFEPLDKA AQKRQRRMIK  180
NRESAARSRE RKQEHQVKLE SLASKLEEEN DHLMKEKAAQ TKERLKLLME KIVPVVEQQK  240
PPRRLRRVRS WQW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021820424.19e-67G-box-binding factor 4-like isoform X1
TrEMBLA0A1S2XYG22e-65A0A1S2XYG2_CICAR; G-box-binding factor 4-like
STRINGXP_004496457.14e-66(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.14e-37G-box binding factor 4