PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0006s0261.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 456aa MW: 51201.5 Da PI: 6.5714

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0006s0261.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	63.2	4.3e-20	349	397	2	50
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 +++++e++s yF+l++++AAk+Lg+++T +K+ CR++ ++RWP+Rk+ Kalax.0006s0261.1.p 349 AANLTVEEVSGYFHLTLTKAAKQLGISATFVKKFCRRHRMPRWPYRKVV 397 579********************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.971	332	420	IPR003035	RWP-RK domain
Pfam	PF02042	2.7E-18	351	396	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence Send to blast
MDSSFGVDKL KIRAQSAHSV IYQRSVTVTN YRRLSDKIQN SKNVSATCSV NLTQLPPPLR 60 CSRFRLHPAI DGAFDSVMAD HSIDDFINFD LDQIDIYEFL NSDPPLITQP PNQQDVHEDA 120 IGDTIDPMDD PFVQSLFGTW SNEDASGSET KDMNKGQDDR SFPVLEEFEF WSVPAAPTSC 180 SFCQVLREIV HTNGIYSTKL EIHGRVGMIC HAILVTQISS GELTHQMLNL SKKSMEGVKE 240 FLVQYCRSKK QAGFVLVSDP MAPFYEALCV GLDLSDNFGY SDDEADPPPG HGYGATNNHQ 300 AYGEAANQTS SSLPRSGPTR KSHQAALKAA NQTSSSDTRT WYQKQRDRAA NLTVEEVSGY 360 FHLTLTKAAK QLGISATFVK KFCRRHRMPR WPYRKVVEVE PNLSSPSIKC NESRISELRE 420 VLQRTIYVNQ QRQIEAEIAR LQRGVEEIYI RFRAS*

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence Send to blast

MDSSFGVDKL KIRAQSAHSV IYQRSVTVTN YRRLSDKIQN SKNVSATCSV NLTQLPPPLR  60
CSRFRLHPAI DGAFDSVMAD HSIDDFINFD LDQIDIYEFL NSDPPLITQP PNQQDVHEDA  120
IGDTIDPMDD PFVQSLFGTW SNEDASGSET KDMNKGQDDR SFPVLEEFEF WSVPAAPTSC  180
SFCQVLREIV HTNGIYSTKL EIHGRVGMIC HAILVTQISS GELTHQMLNL SKKSMEGVKE  240
FLVQYCRSKK QAGFVLVSDP MAPFYEALCV GLDLSDNFGY SDDEADPPPG HGYGATNNHQ  300
AYGEAANQTS SSLPRSGPTR KSHQAALKAA NQTSSSDTRT WYQKQRDRAA NLTVEEVSGY  360
FHLTLTKAAK QLGISATFVK KFCRRHRMPR WPYRKVVEVE PNLSSPSIKC NESRISELRE  420
VLQRTIYVNQ QRQIEAEIAR LQRGVEEIYI RFRAS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	9e-11	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Kalax.0006s0261.1.p