PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0017s0155.3.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 327aa MW: 36357.1 Da PI: 8.9446

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0017s0155.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.4	3.7e-14	255	299	4	48
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r +r++kNRe+A rsR RK+a++ eLe kv L++eN++L+ + Kalax.0017s0155.3.p 255 ERRHKRMIKNRESAARSRSRKQAYTNELESKVSRLKEENERLRRK 299 5899**************************************944 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.5E-13	246	299	No hit	No description
SMART	SM00338	2.9E-9	252	308	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.484	254	299	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.6E-12	255	299	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.18E-24	256	302	No hit	No description
SuperFamily	SSF57959	3.88E-10	256	300	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MPELSMKVMG SEGGGGNIKQ SPCQPLPRQG SVYSLTLDEV QSQLDLGKPL SSMNLDELLK 60 SVWSIEANQP FGLDVDTNDT LATQTTLQRQ ASLTLTDSFS KKTVDDIWRD IQQSKGSEGR 120 HMHERQPTLG EITLEDFLVK AGVVAESVLD EVQNGGPADS ADTNMIAPQF QQQSPWMSSY 180 PQPHFQRPQQ NVMGVFIPGQ PMPTPMTMVP NGVMDVSFPD NQVALSSPIM GIYSDSHTPS 240 RKRNSSVEVV EKSAERRHKR MIKNRESAAR SRSRKQAYTN ELESKVSRLK EENERLRRKK 300 KLESLLPAAP PPQPKYQLRR TSSSPV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	301	LRRKKKL
2	296	301	RRKKKL

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015876269.1	1e-141	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_024927644.1	1e-141	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	8e-90	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	D9ZIQ3	1e-136	D9ZIQ3_MALDO; BZIP domain class transcription factor
STRING	XP_004306446.1	1e-140	(Fragaria vesca)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	3e-71	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	Kalax.0017s0155.3.p

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]