PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0019s0122.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 380aa    MW: 42322.4 Da    PI: 10.2015
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0019s0122.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.85.1e-1227763787
             trihelix 37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
                         k+ e g+ rs+k+Ckek+en++k+yk+++e  + +  ++ +++++f++lea
  Kalax.0019s0122.1.p 27 KLGELGYVRSAKKCKEKLENVHKYYKRTEEEGRAG-RQDGKSYRFFTRLEA 76
                         67899************************999998.566779******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.7E-72777No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MLSICPESRA GNRWPRQETP ALLKIRKLGE LGYVRSAKKC KEKLENVHKY YKRTEEEGRA  60
GRQDGKSYRF FTRLEALYGA VTATNIQFAT PVSIGVGGGT SGVGVQRGVM QQPFTMYSRD  120
LSTGAGVAVP GSGPPPAPAV GISFSSDSSS SGSFGSDEDE EEVDDMSEEE RPSSNPAGSG  180
QKRKKGYSSR GGHKRRMMDF FEGLMKQVVQ KQEAMQQRFL ETIEKRELDR MVREEAWKRQ  240
EAARLSREQE LMAQERATAA TRDAAIVSFL QKITGQTIQL PQPVPTTTVH QHFDPTIPPA  300
PASASIPSST PQQPRQQSQQ KPHKQQQQQQ PQNSDLIRQH QMLEIHRRDN VNNVAGGIPA  360
KNTKNYTRNR ERDTRSEVL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011470851.11e-81PREDICTED: trihelix transcription factor GTL1 isoform X2
TrEMBLA0A061G1Q91e-79A0A061G1Q9_THECC; Duplicated homeodomain-like superfamily protein, putative isoform 2
TrEMBLA0A2H4NFV42e-79A0A2H4NFV4_FRAAN; Trihelix transcription factor GT-2F
STRINGXP_004309494.14e-80(Fragaria vesca)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.16e-25GT-2-like 1