PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0033s0089.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 414aa    MW: 45388.5 Da    PI: 6.5141
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0033s0089.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.61.5e-09222280563
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          kr++r   NR +A rs +RK  +i+eLe+kv++L++  ++L  +l+ l+     l++e+
  Kalax.0033s0089.1.p 222 KRAKRIWANRQSAARSKERKMRYIAELERKVQSLQTDATSLSAQLSLLQRDTNGLTAEN 280
                          9***********************************************99888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-15218282IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.76220283IPR004827Basic-leucine zipper domain
PfamPF001702.6E-8222277IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.09E-10222273No hitNo description
Gene3DG3DSA:1.20.5.1705.8E-10222276No hitNo description
CDDcd147031.68E-24223272No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MGKDKLPSHG GGLLPPSGRF PTFSPATNTF SMSSEVSSPS LPPMGPGATM DSGRFGHGMP  60
SDSSRFSHDI SQMPDNPPRH LGHRRAHSEI LTLPDDINFD SDLGVVGVMD GPTFSDDTEE  120
DLFSMYLDME KFDSSSATSS FPIGDPMNTT SAPATVTNQS LNVVGTSGEW PRVRHQHSQS  180
MDGSSTIKPE MLMAGSEETS AADSKKAISA AKLAELALID PKRAKRIWAN RQSAARSKER  240
KMRYIAELER KVQSLQTDAT SLSAQLSLLQ RDTNGLTAEN SELKLRLQTM EQQVHLQDAL  300
NDALKEEIQH LKVLTGQTMP NGGPMMNYPA FGGNQPRYAS NQSMHTLMAA QQFQQLQIHS  360
QKQQHHQIQP QQQQQFHHQL DQQQKSGDVK ARNTMPSSSQ MDNAPESNQA PKE*
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015867590.10.0probable transcription factor PosF21
RefseqXP_015867591.10.0probable transcription factor PosF21
RefseqXP_015867592.10.0probable transcription factor PosF21
SwissprotQ040881e-148POF21_ARATH; Probable transcription factor PosF21
TrEMBLM5XCD00.0M5XCD0_PRUPE; Uncharacterized protein
STRINGXP_008222595.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-133bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]