PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0038s0010.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 169aa    MW: 18982.1 Da    PI: 8.5167
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0038s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.6e-10556556
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
                         ++ +r+++NRe+ArrsR +K+ ++++    ++ ++ +N++ +++++e +  +
  Kalax.0038s0010.1.p  5 RKRKRMESNRESARRSRVKKQLQLQQVISDIDRFKRQNSEIASKIDETQGRC 56
                         67899****************************************9977655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-10165IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.507351IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-6453No hitNo description
SuperFamilySSF579593.73E-9559No hitNo description
PfamPF001701.7E-7553IPR004827Basic-leucine zipper domain
CDDcd147021.36E-8656No hitNo description
PROSITE patternPS000360823IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MADERKRKRM ESNRESARRS RVKKQLQLQQ VISDIDRFKR QNSEIASKID ETQGRCFAVE  60
TEMDQVSAQK ADLEQRLRHL LSVADEAEKK LSRSEDVSRL SVELPSSRSN NWSDFSRNRS  120
GLSNGDGGGS GSWMDALDFD LDLSLSPWRS SWMAPSPLIA SAATMSQT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.11e-19basic region/leucine zipper motif 53