PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0043s0013.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 313aa    MW: 34573.4 Da    PI: 4.8827
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0043s0013.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.91.6e-16138190456
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                          ++r +r+ +NRe+ArrsR+RK+a +++Le  v++L +eN +L k+l++  ++ 
  Kalax.0043s0013.1.p 138 VRRSKRMVSNRESARRSRKRKQAHLQQLESQVDQLRGENASLFKQLSTAAQQF 190
                          789****************************************8888777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-17135199IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.277137191IPR004827Basic-leucine zipper domain
PfamPF001702.8E-14138189IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.69E-12139189No hitNo description
Gene3DG3DSA:1.20.5.1703.3E-12139191No hitNo description
CDDcd147027.92E-19140190No hitNo description
PROSITE patternPS000360142157IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MKRSEPELAL EEFLRPDSTT TTTEDWSDNI RQQLDDDWFF LNADIPADFT FDVRAREILT  60
GLSTACGFPE DLLWSAATTT TTIDSQSSIC AGSPLPEKKP QDTPASRLIN SGSDLSEYDD  120
VEIEAGPCEQ SNNSPTDVRR SKRMVSNRES ARRSRKRKQA HLQQLESQVD QLRGENASLF  180
KQLSTAAQQF KDAAANNRVI KSDVEALRAN VKLAEEMIAR GSLTSSLNHL LQTHLSFPQT  240
LMTSHSRLTS VSPTITIPRD EASFTRILPA SGQTTSLAPQ ASDHSNNRTM DDVLSCVTDV  300
WPLEPHVPVV SK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151157RRSRKRK
2151158RRSRKRKQ
3153158SRKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002283059.21e-81PREDICTED: basic leucine zipper 9
TrEMBLA0A438C2302e-80A0A438C230_VITVI; Basic leucine zipper 9
STRINGVIT_04s0008g02750.t015e-81(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.19e-63basic leucine zipper 9