PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0043s0112.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 886aa MW: 98384.6 Da PI: 7.2291

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0043s0112.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.8	2.7e-08	164	215	22	72
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.t 72 +++k+++ + +ev++++ ++g+er +k kw+n+ ++++k+ ++e+++ + Kalax.0043s0112.1.p 164 GNNKSRAEKDREVAEFLNRHGVERDAKAAGTKWDNMLGDFRKVYQWERGGgR 215 45678889999************************************98733 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF56112	1.63E-14	735	870	IPR011009	Protein kinase-like domain
CDD	cd00180	2.56E-13	737	871	No hit	No description
Gene3D	G3DSA:1.10.510.10	5.0E-7	740	835	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 886 aa Download sequence Send to blast
MGAVTGDPLK YPPTTSFEHQ LQLESPNVNP KRPRYGNSSG SQWKQLLPSP TSAQTQPLMQ 60 QALLISASTP DASSPSSSAN PQLQVLQTQQ PSAAAASSTN TAASSPSLDA AGRDEQQHQV 120 HVHGQLRKGK YVSPVWKPYE MLMLAKGWHI QYMSAARPGS DGRGNNKSRA EKDREVAEFL 180 NRHGVERDAK AAGTKWDNML GDFRKVYQWE RGGGRVEAGV TKSYFRLSPY ERKNQHGLPT 240 SFDEEVFEEM ALFMGPRRSS SYSSLLQHTT VGSGKEDDDG AAAAGPSLPV PPVPLSSSVP 300 NTLRRMGKMK MMWEECVNLW AEEGETQSGR VNICSPSTTA SSLSSFLNAD ELVFFDDSMV 360 ATTLEAFENG PLSGFSTDRF APGQQVRVFG RRRAAPRFHA SWLMGCQDPS KYYLDSLKTS 420 PATLPTLVEL SRYLQEPPPK ELRFPLRPEV YRDLPQGKDL FFTTSSEPLD CRMITYDILG 480 QVFRSKNLSE CTLTASGGRD SYIGLWDDCI NVVVCKFCSL GIVFVRKPHH ALPCSTECLW 540 PNVTGFVRGL CLWRGEERGE VRGEGGVMTH PSKSLVQKFL WGYVDLPYVF GYYAVGCTVT 600 FCALSRVSQD KQKQVLCTDL LTIDLSSQAD RLRALIPCWR IATLLPLLAD KCLNYATATS 660 VEAGLPLFSD FERIELGMGD AIERTPNYET RYFSSERRWA SVKEIYGFLE TRIPHSEYMA 720 ESSETQLSLL FKPRGCKVKP RSVDQLIEAL KNITKSLVAL HDLSFMHRDI SWDTVLRRVD 780 SESDEEWFLC RFDAAAGAPQ MSAFCSGVGE GAHAPEMKRG LHGVKVDVWG IGCLIKTSGL 840 LLPMQLTDLQ SRCLEHNQEM RPTAADCYHH LLQLSAAAAA RDYSR*

Sequence ? help Back to Top

Protein Sequence Length: 886 aa Download sequence Send to blast

MGAVTGDPLK YPPTTSFEHQ LQLESPNVNP KRPRYGNSSG SQWKQLLPSP TSAQTQPLMQ  60
QALLISASTP DASSPSSSAN PQLQVLQTQQ PSAAAASSTN TAASSPSLDA AGRDEQQHQV  120
HVHGQLRKGK YVSPVWKPYE MLMLAKGWHI QYMSAARPGS DGRGNNKSRA EKDREVAEFL  180
NRHGVERDAK AAGTKWDNML GDFRKVYQWE RGGGRVEAGV TKSYFRLSPY ERKNQHGLPT  240
SFDEEVFEEM ALFMGPRRSS SYSSLLQHTT VGSGKEDDDG AAAAGPSLPV PPVPLSSSVP  300
NTLRRMGKMK MMWEECVNLW AEEGETQSGR VNICSPSTTA SSLSSFLNAD ELVFFDDSMV  360
ATTLEAFENG PLSGFSTDRF APGQQVRVFG RRRAAPRFHA SWLMGCQDPS KYYLDSLKTS  420
PATLPTLVEL SRYLQEPPPK ELRFPLRPEV YRDLPQGKDL FFTTSSEPLD CRMITYDILG  480
QVFRSKNLSE CTLTASGGRD SYIGLWDDCI NVVVCKFCSL GIVFVRKPHH ALPCSTECLW  540
PNVTGFVRGL CLWRGEERGE VRGEGGVMTH PSKSLVQKFL WGYVDLPYVF GYYAVGCTVT  600
FCALSRVSQD KQKQVLCTDL LTIDLSSQAD RLRALIPCWR IATLLPLLAD KCLNYATATS  660
VEAGLPLFSD FERIELGMGD AIERTPNYET RYFSSERRWA SVKEIYGFLE TRIPHSEYMA  720
ESSETQLSLL FKPRGCKVKP RSVDQLIEAL KNITKSLVAL HDLSFMHRDI SWDTVLRRVD  780
SESDEEWFLC RFDAAAGAPQ MSAFCSGVGE GAHAPEMKRG LHGVKVDVWG IGCLIKTSGL  840
LLPMQLTDLQ SRCLEHNQEM RPTAADCYHH LLQLSAAAAA RDYSR*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010272624.1	0.0	PREDICTED: uncharacterized protein LOC104608361
TrEMBL	A0A1U8B9B1	0.0	A0A1U8B9B1_NELNU; uncharacterized protein LOC104608361
STRING	XP_010272624.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	3e-06	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Kalax.0043s0112.1.p