PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0047s0018.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 260aa MW: 29613.9 Da PI: 7.2537

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0047s0018.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	80	2.5e-25	127	176	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k ++ + ls+yF++pi+ AA eL+v+lT+LK++CR++GI+RWPhRk+ sl Kalax.0047s0018.1.p 127 KVLTRKILSQYFYMPITHAAEELNVGLTLLKKRCRELGIRRWPHRKLMSL 176 679999*****************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.439	108	197	IPR003035	RWP-RK domain
Pfam	PF02042	3.5E-21	129	176	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence Send to blast
MVDWDYGLPV QESLLGSLPT MEEGLLVIDH LSPPMYYHSL VDALPNSYLS QDCQHVPAET 60 KMLTGGYAAD NNELGAVVWN NQIQHQSLSL LQQEDIVVSD ENEMREVDGV GKKRARKVKD 120 EQFGSSKVLT RKILSQYFYM PITHAAEELN VGLTLLKKRC RELGIRRWPH RKLMSLQTLI 180 SNVQELGKQE GDGGKERLMM AVEELERERK MMEELPDMQL EDKTKKLRQA CFKAHYKKRR 240 MMAGNGGQRP QSSSSLSQH*

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021287140.1	6e-69	protein RKD1
Swissprot	Q9M9U9	1e-52	RKD1_ARATH; Protein RKD1
TrEMBL	A0A061FXS1	1e-67	A0A061FXS1_THECC; RWP-RK domain-containing protein, putative
STRING	EOY21863	2e-68	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	5e-48	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Kalax.0047s0018.1.p