PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0048s0059.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 618aa MW: 67999.4 Da PI: 4.7442

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0048s0059.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168	3.1e-52	9	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lp GfrF+Ptdeel+++yL+ k++g++ e+ +vi+e+d++++ePwdLp + +k+++ ew+fF++rd+ky++g+r+nrat++gyWkatgk Kalax.0048s0059.1.p 9 LPLGFRFRPTDEELINHYLRLKINGRDSEV-QVIPEIDVCRWEPWDLPdlSVIKTGDPEWFFFCPRDRKYPNGHRSNRATEAGYWKATGK 97 699**********************999.99**********96448888999**************************** PP NAM 89 dkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 d+++++k +++l+g+kktLvfy+grap+g++t+W+mheyr+ Kalax.0048s0059.1.p 98 DRTIKAKklpaTTNLIGMKKTLVFYRGRAPRGVRTHWIMHEYRA 141 **988888888*************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.31E-60	4	164	IPR003441	NAC domain
PROSITE profile	PS51005	57.748	9	164	IPR003441	NAC domain
Pfam	PF02365	2.2E-27	10	140	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence Send to blast
MAILSVEALP LGFRFRPTDE ELINHYLRLK INGRDSEVQV IPEIDVCRWE PWDLPDLSVI 60 KTGDPEWFFF CPRDRKYPNG HRSNRATEAG YWKATGKDRT IKAKKLPATT NLIGMKKTLV 120 FYRGRAPRGV RTHWIMHEYR ATEKDLDGTG PGQGAFVLCR LFKKSDETID VPNYDEVDNT 180 GSSPATTRSS PDDTSSDIVQ EAGAPERKQP EGIKRWLTDK ADKMTDSFAG PVDSCCSNLA 240 SDSEDHAVER TAPETHPLVG TNPEVYESNN DLLDSQEFDS FGSLIQKDLP YVGSPFASDF 300 GFRYDVFQDG TGEQDIFLTE LLDEVLNDFS CEESASQKNS AIGSESYLSD QLCVSPYGQS 360 DAYGIGNGIY GNKDAEMSQL QHDLGVGGPL WSNESEGGKS NMQIPAYPGY FQADRSFCGG 420 VHITTSVELP ESATVLPDKS FRSEESAGRK TSANDGAKTG IKIRTRQPQR QPNSDSSQQQ 480 GIAPRRIRLQ IRNTGNALGE TMKNEGETYV EPVISNDALA IERKASTTEV EVETSLTASE 540 KKSERSDLIQ EQSSSSLRQR VKQSGEGNTP LVTSQPRQEI AAKNNPGSLK AVFAGVALFT 600 MICLTIVLGV AGWYSTQ*

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence Send to blast

MAILSVEALP LGFRFRPTDE ELINHYLRLK INGRDSEVQV IPEIDVCRWE PWDLPDLSVI  60
KTGDPEWFFF CPRDRKYPNG HRSNRATEAG YWKATGKDRT IKAKKLPATT NLIGMKKTLV  120
FYRGRAPRGV RTHWIMHEYR ATEKDLDGTG PGQGAFVLCR LFKKSDETID VPNYDEVDNT  180
GSSPATTRSS PDDTSSDIVQ EAGAPERKQP EGIKRWLTDK ADKMTDSFAG PVDSCCSNLA  240
SDSEDHAVER TAPETHPLVG TNPEVYESNN DLLDSQEFDS FGSLIQKDLP YVGSPFASDF  300
GFRYDVFQDG TGEQDIFLTE LLDEVLNDFS CEESASQKNS AIGSESYLSD QLCVSPYGQS  360
DAYGIGNGIY GNKDAEMSQL QHDLGVGGPL WSNESEGGKS NMQIPAYPGY FQADRSFCGG  420
VHITTSVELP ESATVLPDKS FRSEESAGRK TSANDGAKTG IKIRTRQPQR QPNSDSSQQQ  480
GIAPRRIRLQ IRNTGNALGE TMKNEGETYV EPVISNDALA IERKASTTEV EVETSLTASE  540
KKSERSDLIQ EQSSSSLRQR VKQSGEGNTP LVTSQPRQEI AAKNNPGSLK AVFAGVALFT  600
MICLTIVLGV AGWYSTQ*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-45	4	164	12	165	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-45	4	164	12	165	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-45	4	164	12	165	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-45	4	164	12	165	NO APICAL MERISTEM PROTEIN
3swm_A	1e-45	4	164	15	168	NAC domain-containing protein 19
3swm_B	1e-45	4	164	15	168	NAC domain-containing protein 19
3swm_C	1e-45	4	164	15	168	NAC domain-containing protein 19
3swm_D	1e-45	4	164	15	168	NAC domain-containing protein 19
3swp_A	1e-45	4	164	15	168	NAC domain-containing protein 19
3swp_B	1e-45	4	164	15	168	NAC domain-containing protein 19
3swp_C	1e-45	4	164	15	168	NAC domain-containing protein 19
3swp_D	1e-45	4	164	15	168	NAC domain-containing protein 19
4dul_A	1e-45	4	164	12	165	NAC domain-containing protein 19
4dul_B	1e-45	4	164	12	165	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023927949.1	1e-178	protein NTM1-like 9
TrEMBL	A0A2N9IEK6	1e-172	A0A2N9IEK6_FAGSY; Uncharacterized protein
STRING	XP_008360722.1	1e-166	(Malus domestica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	1e-121	NAC transcription factor-like 9

Link Out ? help Back to Top
Phytozome	Kalax.0048s0059.1.p