PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0050s0040.3.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 511aa MW: 55567.9 Da PI: 7.4215

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0050s0040.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.3	9.2e-10	422	466	3	47
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 ++kr++r NR +A rs +RK +i eLe kv++L++e ++L Kalax.0050s0040.3.p 422 DSKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSA 466 68*************************************999975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.6E-16	420	484	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.967	422	485	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.3E-9	423	482	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.8E-11	424	481	No hit	No description
SuperFamily	SSF57959	4.92E-11	424	475	No hit	No description
CDD	cd14703	1.34E-23	425	476	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence Send to blast
MGDAGKAGNE TMQRVQSSFG TVHSSMPEQT MSLNHQLELT HLSTSLNVAP SKHFGQGFGV 60 DHGKRALVSP SNNGQIPPLS TYSHIPVCRP SVLSMGSQSF VQSPYHSRSI SQPPVFNLDS 120 LPPLSPSPFR DSTPNANQLS VDVNMEDREA RSHLLPPSPY TRSNGATRPG ESLPPRKAHR 180 RSNSDIPFGF SMVMQSSPPL LPLKGPITLE RSASDRENLG GTSQSICRTS RNKVIDYNGE 240 GTGERKSEGE VVDDLFNAYM NLDGTDATKP AVNGEKNSNS HHEDLDSQAS GSKTNAGENS 300 DNEAESCINE SGNGVVKAGT HGSGCTERRE GIKRSAVGDI APTARHYRSI SMDSFMSNMH 360 FEEELPKLPA SPGPRAGEMS SSNLFDKNSN TFCLEFGNGE FSGAELKKIM ANEKLAEIAL 420 ADSKRAKRIL ANRQSAARSK ERKMRYISEL EHKVQTLQTE ATTLSAQVIV LQRESAGLSS 480 QNNELRFRLQ AMEQKVQLCD GMDPRMCKLY *

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence Send to blast

MGDAGKAGNE TMQRVQSSFG TVHSSMPEQT MSLNHQLELT HLSTSLNVAP SKHFGQGFGV  60
DHGKRALVSP SNNGQIPPLS TYSHIPVCRP SVLSMGSQSF VQSPYHSRSI SQPPVFNLDS  120
LPPLSPSPFR DSTPNANQLS VDVNMEDREA RSHLLPPSPY TRSNGATRPG ESLPPRKAHR  180
RSNSDIPFGF SMVMQSSPPL LPLKGPITLE RSASDRENLG GTSQSICRTS RNKVIDYNGE  240
GTGERKSEGE VVDDLFNAYM NLDGTDATKP AVNGEKNSNS HHEDLDSQAS GSKTNAGENS  300
DNEAESCINE SGNGVVKAGT HGSGCTERRE GIKRSAVGDI APTARHYRSI SMDSFMSNMH  360
FEEELPKLPA SPGPRAGEMS SSNLFDKNSN TFCLEFGNGE FSGAELKKIM ANEKLAEIAL  420
ADSKRAKRIL ANRQSAARSK ERKMRYISEL EHKVQTLQTE ATTLSAQVIV LQRESAGLSS  480
QNNELRFRLQ AMEQKVQLCD GMDPRMCKLY *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023883422.1	0.0	transcription factor RF2a
TrEMBL	A0A2N9G6H5	0.0	A0A2N9G6H5_FAGSY; Uncharacterized protein
STRING	cassava4.1_004047m	0.0	(Manihot esculenta)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-126	bZIP family protein

Link Out ? help Back to Top
Phytozome	Kalax.0050s0040.3.p