PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0055s0081.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 181aa    MW: 19432.8 Da    PI: 5.074
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0055s0081.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.78.9e-162168355
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         y+GVr  ++ g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+ +l+g
  Kalax.0055s0081.1.p 21 YRGVR--SRGGKWVCEIREPRK---TSRIWLGTFPKPEMAAAAYDVAAIALKG 68
                         9***6..679*********843...5***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.5852076IPR001471AP2/ERF domain
SMARTSM003804.1E-272082IPR001471AP2/ERF domain
PRINTSPR003679.5E-72132IPR001471AP2/ERF domain
CDDcd000181.64E-142176No hitNo description
SuperFamilySSF541718.5E-182177IPR016177DNA-binding domain
PfamPF008472.6E-92168IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-272177IPR001471AP2/ERF domain
PRINTSPR003679.5E-75878IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MAAPNGAPSS HSSKPDQPFS YRGVRSRGGK WVCEIREPRK TSRIWLGTFP KPEMAAAAYD  60
VAAIALKGKE AILNFPGSAR SYPVPVTSSP ADIRVAAAAA AAKKQEETSR ASTKTDNEED  120
LTTTLSLSKK SGDQYVDDEE IFEMPSLLVG MAEGMMISPP RMEEPDNNAE GGSQSLWSYF  180
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023521236.16e-57ethylene-responsive transcription factor ERF026-like
RefseqXP_023521505.16e-57ethylene-responsive transcription factor ERF026-like
RefseqXP_023532975.16e-57ethylene-responsive transcription factor ERF026-like
TrEMBLB9GW614e-53B9GW61_POPTR; Uncharacterized protein
STRINGPOPTR_0003s12120.17e-54(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.17e-39ERF family protein