PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0057s0033.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 318aa MW: 35079.4 Da PI: 6.2661

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0057s0033.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42	2e-13	247	290	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+k+ Le+e ++Lkk+ Kalax.0057s0033.1.p 247 RRQKRMIKNRESAARSRARKQAYTNELENKISYLEEEIERLKKQ 290 79***************************************964 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.4E-14	240	298	No hit	No description
SMART	SM00338	1.6E-10	243	311	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.875	245	290	IPR004827	Basic-leucine zipper domain
CDD	cd14707	5.95E-23	247	301	No hit	No description
Pfam	PF00170	4.5E-11	247	290	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.14E-11	247	293	No hit	No description
PROSITE pattern	PS00036	0	250	265	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
MGAKTMGSQG GGGVQPHTLT REGSLYSLTL DEVESHLGSL DKPLGCMNLD ELLKTVWSAE 60 VGQGTGLSVG EQPGQLSSSS SVHWLPNLSR DLSSKTVDEV WRSIQHRRRK PDQERQRTLG 120 EMTLEDFLAK AGIVNGPDGE SCDDLFGDEQ CGELSLQPCW AQYQLSLVEQ TQACQQQRQQ 180 LAQSFSGFMA GHSHELLQQP MIDVAAYPET QLAVAPVSPA RGTLSDTQTL GRKRVAPGEV 240 VEKTVERRQK RMIKNRESAA RSRARKQAYT NELENKISYL EEEIERLKKQ QAAEKEVQCA 300 PQPDPKPQLR RTSSGPL*

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027065177.1	1e-96	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_027065178.1	1e-96	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_027065179.1	1e-96	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_027065181.1	1e-96	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	5e-74	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A068VAQ2	8e-96	A0A068VAQ2_COFCA; Uncharacterized protein
STRING	AES81050	2e-93	(Medicago truncatula)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	6e-75	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	Kalax.0057s0033.1.p

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]