PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0061s0006.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 387aa MW: 40662.7 Da PI: 9.8052

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0061s0006.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.2	5.5e-16	308	359	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ e+ ++ Kalax.0061s0006.1.p 308 RRQRRMIKNRESAARSRARKQAYTTELEAEVAKLKEENQELQKKQAEIMEMH 359 79****************************************9999888875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.8E-14	304	368	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.381	306	357	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.08E-25	308	355	No hit	No description
SuperFamily	SSF57959	1.44E-11	308	358	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.3E-15	308	357	No hit	No description
Pfam	PF00170	7.8E-14	308	360	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	311	326	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence Send to blast
MGTNFNFNYF GGGGGGERQL GDLPLTRQTS IYALTFDELQ SAMGGSLGKD FGSMNMDELL 60 KNIWTAEESH TTAAAAGNDG GVGGGSSLQR QGSVTLPRTL SHKTVDEIWK DMTSKEVNGG 120 GGGGGSGGFA QRQPTLGEIT LEEFLVRAGV VREDANTPQN LAFGFQQAGL MSNSSNQMMM 180 QSANLPMNVN WVTSSLQQPL AASQAQPLFP KQPGLSYGHP LGLPGGAQLG SPRLRGGLVG 240 VSDPGLIRGG GLGVAGLGPG AGVTVAVGSP AQLASNGDTS SLSPVPYVFN GGVRGRRANG 300 AVEKVVERRQ RRMIKNRESA ARSRARKQAY TTELEAEVAK LKEENQELQK KQAEIMEMHK 360 NQVLEMMSNQ GGGKRQCLGR TQTGPW*

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence Send to blast

MGTNFNFNYF GGGGGGERQL GDLPLTRQTS IYALTFDELQ SAMGGSLGKD FGSMNMDELL  60
KNIWTAEESH TTAAAAGNDG GVGGGSSLQR QGSVTLPRTL SHKTVDEIWK DMTSKEVNGG  120
GGGGGSGGFA QRQPTLGEIT LEEFLVRAGV VREDANTPQN LAFGFQQAGL MSNSSNQMMM  180
QSANLPMNVN WVTSSLQQPL AASQAQPLFP KQPGLSYGHP LGLPGGAQLG SPRLRGGLVG  240
VSDPGLIRGG GLGVAGLGPG AGVTVAVGSP AQLASNGDTS SLSPVPYVFN GGVRGRRANG  300
AVEKVVERRQ RRMIKNRESA ARSRARKQAY TTELEAEVAK LKEENQELQK KQAEIMEMHK  360
NQVLEMMSNQ GGGKRQCLGR TQTGPW*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027091459.1	1e-153	bZIP transcription factor 46-like
Refseq	XP_027091460.1	1e-153	bZIP transcription factor 46-like
Swissprot	Q9M7Q4	1e-111	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A067L1G8	1e-139	A0A067L1G8_JATCU; Uncharacterized protein
STRING	POPTR_0002s12710.1	1e-138	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-64	abscisic acid responsive elements-binding factor 2

Link Out ? help Back to Top
Phytozome	Kalax.0061s0006.1.p

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]