PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0072s0037.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family FAR1
Protein Properties Length: 98aa    MW: 11256.1 Da    PI: 10.8469
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0072s0037.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.42.6e-093445190
                 FAR1 51 errtraetrtgCkaklkvkkek..dgkwevtkleleHnHela 90
                         ++r+raetrt+Ck k+ +++e    gk++++ l+leHnH l 
  Kalax.0072s0037.1.p  3 KKRERAETRTSCKVKFGIRREPsaFGKYRIYMLHLEHNHLLY 44
                         789*****************998889*************885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.8E-6243IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MTKKRERAET RTSCKVKFGI RREPSAFGKY RIYMLHLEHN HLLYTRATIH MMPSQRHITE  60
IQANKIKLAD ASGIQVKRPH EFMSKKAGGV ESTGFIE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-08FAR1-related sequence 5