PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0072s0068.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 266aa    MW: 29543.2 Da    PI: 9.8058
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0072s0068.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH444e-1465117155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          r++ hn+ Er RR++iN+ ++ Lr+llP +  ++s+++s  +++ ++ +YI +Lq
  Kalax.0072s0068.1.p  65 RKVHHNASERHRRKKINELYSSLRSLLPAS--EQSRRMSIPTTVARVLKYIPELQ 117
                          7899*************************6..5*******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.36E-1662144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.04E-1263121No hitNo description
PROSITE profilePS5088814.80564116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-1165117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-1465137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-1070122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MLSVSSSSSA AMFGWPLEEA VYSYNMNHGF YDHTGGELAA AAQTDRPGNF APDGDRIDGK  60
SGERRKVHHN ASERHRRKKI NELYSSLRSL LPASEQSRRM SIPTTVARVL KYIPELQEEV  120
ARMEKRKQAM SKKMDKVRES VSSLPSKSTG PGHHGQEVTG REEEAKAHHM TMENSNNRSS  180
VSTSQVADRE VVIQISTVRV SVSEILSSLE GDGFQLINAS SSESHGGRLF LNLHLQKLDG  240
IRNAECQGLE KKLLFMVENR RPRVV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16378RRKVHHNASERHRRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.17e-45bHLH family protein