PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0078s0051.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 132aa    MW: 13978.6 Da    PI: 9.8666
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0078s0051.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.7e-054769123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C +C+++F ++  L  H++ H
  Kalax.0078s0051.1.p 47 FTCLYCNRRFCNSQALGGHQNAH 69
                         89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.37E-54674No hitNo description
PROSITE profilePS5015711.1154774IPR007087Zinc finger, C2H2
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MADQKNFLKQ AASARQHPSP AAAAAPAFFF PNTHYYPPHP AVQAAGFTCL YCNRRFCNSQ  60
ALGGHQNAHK RERAAARRRP APGGQPIHNN NNAAAAAAWL YPAATLLHYN SISSSGGGAG  120
ADEEIDLTLR L*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099006.11e-15zinc finger protein 4
TrEMBLA0A4D8Y9V11e-15A0A4D8Y9V1_SALSN; Uncharacterized protein
STRINGMigut.F00027.1.p1e-13(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.19e-10zinc finger protein 4