PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0093s0043.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ZF-HD
Protein Properties Length: 192aa    MW: 21362.2 Da    PI: 8.6637
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0093s0043.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer37.55.4e-121153855
          ZF-HD_dimer  8 eClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRr 55
                          C +N Aa+ G  + DGC+ ++p++g        +C  CgCHR FH r
  Kalax.0093s0043.1.p 11 CCNRNWAAQHGLVVRDGCRQYVPEPGM-----PNRCFVCGCHRHFHQR 53
                         389********************9665.....58************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5152312.429954IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047708.4E-91153IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257744.0E-41253IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.604.5E-7106160IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MNANRYYYDG CCNRNWAAQH GLVVRDGCRQ YVPEPGMPNR CFVCGCHRHF HQRCVFLGMP  60
SNPPPPPAQE PPTPPPPQRQ PRPLNVVRPV EVHAREGNEE PQPFRRFTSD QLASMELVAE  120
EINWDISRLK MNNDELAEAC HPIGVTVTQF KRWVRVQKRK RRIGIGGRNE AGASGTATGS  180
GGCHPAATDS A*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14687.15e-09homeobox protein 32