PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0095s0040.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 369aa    MW: 39574.1 Da    PI: 7.2539
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0095s0040.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_167.81.8e-21224286163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e+ lk errkq+NRe+ArrsR+RK+ae+eeL+ kv++L aeN +Lk+ +++l k+++klk e+
  Kalax.0095s0040.2.p 224 ERHLKQERRKQSNRESARRSRLRKQAETEELAAKVDVLMAENVTLKSDISQLVKNSEKLKLEN 286
                          789*********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.4E-27196IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.0E-13222283No hitNo description
SMARTSM003387.3E-17224288IPR004827Basic-leucine zipper domain
PfamPF001706.1E-20224286IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.128226289IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.38E-10227283No hitNo description
CDDcd147023.55E-18229275No hitNo description
PROSITE patternPS000360231246IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MGNNEESKSC KSDKSTSPAP QDLIGMHVHP PADWAAMQAF YGPRIPLPQY YNSAYPAGHP  60
PHPYMWALPQ AMMPSFADPY AAIYSPGGVY AHLGVPIGSP KLGLGALSTL SATDALAATA  120
LSIQTPGKTS GNTTGGSMDS ESGDSGGSSC GSGVKTSGDE QSLIKRKRER PLDIGIGVGP  180
APNGKLENVT ALDMKTNHIV DSNLSVDAQQ SGSKLSSETC FQSERHLKQE RRKQSNRESA  240
RRSRLRKQAE TEELAAKVDV LMAENVTLKS DISQLVKNSE KLKLENARMM EKLKNAKFEK  300
AERIGPNDTD DDRNKTRSTE NLLSRVNNSG SAVTQEEEGE MYSNNNSNPT KLHQLMDASP  360
RADAVAAS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1240246RRSRLRK
2240247RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002279966.21e-102PREDICTED: common plant regulatory factor 1 isoform X1
TrEMBLA0A2P5E8F91e-102A0A2P5E8F9_TREOI; Basic-leucine zipper transcription factor
STRINGXP_002511955.11e-103(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.16e-38G-box binding factor 3