PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0097s0013.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 163aa    MW: 17385.1 Da    PI: 7.6051
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0097s0013.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.59.5e-152472153
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53
                         +++kG+r++k +g+Wv+eIr+p     +  r +lg++ tae Aa+a+  a  +l
  Kalax.0097s0013.1.p 24 KKFKGIRRRK-WGKWVSEIRVPG----TpNRLWLGSYSTAEAAAAAHQVASFYL 72
                         59*****998.**********82....589*********777777776666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.08E-142478No hitNo description
PfamPF008474.1E-82571IPR001471AP2/ERF domain
PROSITE profilePS5103218.1622583IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.1E-212576IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-142575IPR016177DNA-binding domain
SMARTSM003808.3E-182586IPR001471AP2/ERF domain
PRINTSPR003672.1E-82637IPR001471AP2/ERF domain
PRINTSPR003672.1E-84864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MSFTSSSGDG GASEHESKLY MDKKKFKGIR RRKWGKWVSE IRVPGTPNRL WLGSYSTAEA  60
AAAAHQVASF YLRSASSSSM ERAEDGVSLS PRSVQKAASD AGMAVDAAHR VFMQQGQNGE  120
DVGNGRGGPV ETWEENTSSG GSWSNGGKCR ADDLNVSVDD YL*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007019844.22e-39PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotQ9C9I83e-30ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A061FRA91e-37A0A061FRA9_THECC; Integrase-type DNA-binding superfamily protein, putative
STRINGEOY170692e-38(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.18e-20ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]