PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0099s0025.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 237aa    MW: 26059.4 Da    PI: 9.1449
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0099s0025.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.14.4e-14172228359
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                          + kr+rr++kNRe+A rsR+RK++ + +Le  + +Le+eN+ L ke    +ke  kl
  Kalax.0099s0025.2.p 172 AQKRQRRMIKNRESAARSRERKQEHQVKLESLASKLEEENDNLMKEKAAQTKERLKL 228
                          78***************************************9999877777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.2E-13166228No hitNo description
SMARTSM003384.2E-11170234IPR004827Basic-leucine zipper domain
PfamPF001702.4E-12171227IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.955172228IPR004827Basic-leucine zipper domain
CDDcd147077.66E-15174216No hitNo description
SuperFamilySSF579591.05E-10174229No hitNo description
PROSITE patternPS000360177192IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MASLTNMMTA SSTTTINSDL PRRTASSDHN TKSANESDDV PEDTTSRQAS KRRTVEDVWK  60
GIVAGEKKVC KVEVPDDMMT LEDFLVRAGA VDREEVVDDH VKVRVPLSAS VSAGLGTMTS  120
RLLSFDSINL SPFPSGGGSS IYGSGIAFTD SGGLGRRNMR GSCVFEPLDK AAQKRQRRMI  180
KNRESAARSR ERKQEHQVKL ESLASKLEEE NDNLMKEKAA QTKERLKLVS FKIYIE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027366272.12e-55G-box-binding factor 4-like
RefseqXP_027366273.12e-55G-box-binding factor 4-like
TrEMBLA0A0S3SNB49e-49A0A0S3SNB4_PHAAN; Uncharacterized protein
TrEMBLA0A1S2XYG27e-49A0A1S2XYG2_CICAR; G-box-binding factor 4-like
TrEMBLA0A1S3V7L17e-49A0A1S3V7L1_VIGRR; G-box-binding factor 4 isoform X1
STRINGXP_004496457.11e-49(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.13e-29G-box binding factor 4