PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0103s0077.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 432aa MW: 45745.6 Da PI: 10.249

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0103s0077.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.8	1.5e-15	355	409	5	59
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+aeN++L+ + e l k+ ++ Kalax.0103s0077.1.p 355 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKAENQELQRKQEVLMKLQDSQ 409 79****************************************9999998877665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.8E-15	351	415	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.45	353	404	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.04E-27	355	409	No hit	No description
SuperFamily	SSF57959	2.13E-11	355	404	No hit	No description
Pfam	PF00170	1.9E-13	355	407	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.5E-15	355	403	No hit	No description
PROSITE pattern	PS00036	0	358	373	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence Send to blast
MGTDLNFGGF GRAGGGGGGS APVGRQTSVY SLTLDELQSS VGGSLGKDFG SMNMDELLKN 60 IWTAEEMQTM TTSCSGAAQM SVGASSGGGL QKQGSLTLPR TLSQKTVGEV WKDVHKEYGA 120 GKDGTWTSVT GLQQRQQSLK EITLEEFLVR AGVVREDLNA YTLQALANSS NNGGPFYSDH 180 LKENTNKGTS GHGIGFPSAA QGLGLTNQVP GAGNQIHVQA PILPLNVNGA RSSQQPVLSP 240 QTQKKPQLFP KLPGPPGYTG QMDGGVQLAS PRIRGGLVGM PVNTTSMVQG SGMGMVGLGT 300 ASMNMVNESS PNQLSSDGAG KSNGDLTSVS PVPYMFSGGI RGRRVNGAME KVVERRQRRM 360 IKNRESAARS RARKQAYTME LEAEVAKLKA ENQELQRKQE VLMKLQDSQA MESMPPGPKR 420 QCLRRVQSSP W*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence Send to blast

MGTDLNFGGF GRAGGGGGGS APVGRQTSVY SLTLDELQSS VGGSLGKDFG SMNMDELLKN  60
IWTAEEMQTM TTSCSGAAQM SVGASSGGGL QKQGSLTLPR TLSQKTVGEV WKDVHKEYGA  120
GKDGTWTSVT GLQQRQQSLK EITLEEFLVR AGVVREDLNA YTLQALANSS NNGGPFYSDH  180
LKENTNKGTS GHGIGFPSAA QGLGLTNQVP GAGNQIHVQA PILPLNVNGA RSSQQPVLSP  240
QTQKKPQLFP KLPGPPGYTG QMDGGVQLAS PRIRGGLVGM PVNTTSMVQG SGMGMVGLGT  300
ASMNMVNESS PNQLSSDGAG KSNGDLTSVS PVPYMFSGGI RGRRVNGAME KVVERRQRRM  360
IKNRESAARS RARKQAYTME LEAEVAKLKA ENQELQRKQE VLMKLQDSQA MESMPPGPKR  420
QCLRRVQSSP W*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028806847.1	1e-134	bZIP transcription factor TRAB1-like
Swissprot	Q9M7Q4	1e-102	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A061FIW7	1e-127	A0A061FIW7_THECC; Abscisic acid responsive elements-binding factor 2 isoform 1
STRING	EOY14438	1e-128	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	7e-85	abscisic acid responsive elements-binding factor 2

Link Out ? help Back to Top
Phytozome	Kalax.0103s0077.1.p

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]