PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0107s0067.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 309aa    MW: 33380.6 Da    PI: 10.1932
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0107s0067.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.47.6e-1830112186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          +W +  v  L+ea++ ++   +r+klk+++Weev+++++++    ++++qCk+k+e+++kry+  ++ + +    s st+p++++++
  Kalax.0107s0067.1.p  30 EWGEGAVASLLEAYEAKWVLRNRAKLKGHDWEEVARFVSATAHaPKTQTQCKNKIESMKKRYRSAAAASAG----SASTWPFYQRIH 112
                          5*************************************87776599*******************999997....4679*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138379.2E-2128113No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MEKATANHEQ PPLASKPPPC GGGDKLKRDE WGEGAVASLL EAYEAKWVLR NRAKLKGHDW  60
EEVARFVSAT AHAPKTQTQC KNKIESMKKR YRSAAAASAG SASTWPFYQR IHNLLRGDNN  120
NTGGGGSSRA APQISSSPLE APSPPPFPAT AQESNGLVFK AAEQEAEDDA GAKLLLSQPD  180
GAHDKTLTHP NSTDSASTTP AFYRDGGKRI RPSSSNARKK RKSGVLVAES VRWLAEAVVR  240
TEKARMETMR ELEKMRIEAE MKRGELELKR TRIIADTQLQ IARLLSGSCV LVPKTADGSP  300
PSFQPGTS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020207224.12e-80trihelix transcription factor ASIL1
TrEMBLA0A371H2778e-77A0A371H277_MUCPR; Trihelix transcription factor ASIL2 (Fragment)
STRINGGLYMA13G26550.12e-77(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.16e-37sequence-specific DNA binding transcription factors