PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0116s0067.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 417aa MW: 43221.4 Da PI: 10.1003

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0116s0067.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.6	7.3e-15	347	390	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ Kalax.0116s0067.1.p 347 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELQKK 390 79*************************************99875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.1E-12	343	399	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.231	345	390	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.1E-12	347	390	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.42E-25	347	396	No hit	No description
SuperFamily	SSF57959	1.0E-10	347	390	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.6E-14	347	390	No hit	No description
PROSITE pattern	PS00036	0	350	365	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence Send to blast
MGTNLNFNHF GGEAAGGGGG GRQVGNSPLI RQTSIYALTF DELQNTMGGS IGKDFGSMNM 60 DELLKNIWTA EESQTMAAAA AAAAAAGGGA IGGGVGSSGG CNLQRQGSLT LPRTLSQKTV 120 DEIWKDMSKD GGGAGGGASG AGFAQRQPTL GEITLEEFLV RAGVVREDAN IAQNLASNGT 180 TNGVGGFYGD LIRNNNGRGV TSDALGGFGF QQAGLVSSCG QMMMQPANLP LNINGVRSSD 240 QQPQKHTHQQ PLFPKQPALS YANPLGGSPR LRGGLVGLAD PGLIQGGGLG MTGLGVTVAN 300 GSPAQLSSDG LGRSNGDTSS LSPVPYAFSA GIRGRRANGV VEKVVERRQR RMIKNRESAA 360 RSRARKQAYT MELEAEVAKL KEENQELQKK QVLEMMNNQG GGGKRQCLRR TQTGPW*

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence Send to blast

MGTNLNFNHF GGEAAGGGGG GRQVGNSPLI RQTSIYALTF DELQNTMGGS IGKDFGSMNM  60
DELLKNIWTA EESQTMAAAA AAAAAAGGGA IGGGVGSSGG CNLQRQGSLT LPRTLSQKTV  120
DEIWKDMSKD GGGAGGGASG AGFAQRQPTL GEITLEEFLV RAGVVREDAN IAQNLASNGT  180
TNGVGGFYGD LIRNNNGRGV TSDALGGFGF QQAGLVSSCG QMMMQPANLP LNINGVRSSD  240
QQPQKHTHQQ PLFPKQPALS YANPLGGSPR LRGGLVGLAD PGLIQGGGLG MTGLGVTVAN  300
GSPAQLSSDG LGRSNGDTSS LSPVPYAFSA GIRGRRANGV VEKVVERRQR RMIKNRESAA  360
RSRARKQAYT MELEAEVAKL KEENQELQKK QVLEMMNNQG GGGKRQCLRR TQTGPW*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027091459.1	1e-151	bZIP transcription factor 46-like
Refseq	XP_027091460.1	1e-151	bZIP transcription factor 46-like
Swissprot	Q9M7Q4	1e-113	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2C9U138	1e-149	A0A2C9U138_MANES; Uncharacterized protein
STRING	cassava4.1_007256m	1e-146	(Manihot esculenta)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	6e-71	abscisic acid responsive elements-binding factor 2

Link Out ? help Back to Top
Phytozome	Kalax.0116s0067.1.p

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]