PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0119s0040.2.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 414aa MW: 45179.5 Da PI: 6.5782

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0119s0040.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.4	2.4e-16	204	257	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + kr rr+ +NRe+ArrsR+RK+a + Le+ v++L eN++L ++l++ ++k Kalax.0119s0040.2.p 204 DAKRVRRMLSNRESARRSRRRKQAHLTDLETQVAQLRVENSSLT---NRLNDICQKF 257 689****************************************9...6666666654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.1E-12	200	253	No hit	No description
SMART	SM00338	9.2E-17	202	266	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.415	204	267	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.1E-13	205	254	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.39E-12	206	255	No hit	No description
PROSITE pattern	PS00036	0	209	224	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	1.1E-35	273	403	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence Send to blast
MDRVFSVEGI ADHFWSSPPP SQLVNHSNAD ASPSNTTMNR SSSEWAFQLF IQENTHSPAA 60 SKLHDDEDVV EIKDHPAAPP NVPIDSDEYQ AFLKTRLDLA CAAVAMTRQA STGKPQDSST 120 STDSGTKALN ASQVRSHVNK KGSGSDSSKR KNKDGPLGNP TLPAKPSKHV VQVKSTTSGS 180 SRELSDDDEL EGVTEMTGDM DHTDAKRVRR MLSNRESARR SRRRKQAHLT DLETQVAQLR 240 VENSSLTNRL NDICQKFDEV SVDNRVLKAD VETLRAKVKM AEETVKRVTG QSPMFQTMSE 300 TSTFNTQSYD GDNSDISTDA AVPIQDDRSD HIYQQHASNP LTATPLHDPR VANSLSNNSS 360 TENACPNSSA AETITLSGNK TGRMSSMQRV ASLEHLQKRI RGNSSATQCN GEQ*

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence Send to blast

MDRVFSVEGI ADHFWSSPPP SQLVNHSNAD ASPSNTTMNR SSSEWAFQLF IQENTHSPAA  60
SKLHDDEDVV EIKDHPAAPP NVPIDSDEYQ AFLKTRLDLA CAAVAMTRQA STGKPQDSST  120
STDSGTKALN ASQVRSHVNK KGSGSDSSKR KNKDGPLGNP TLPAKPSKHV VQVKSTTSGS  180
SRELSDDDEL EGVTEMTGDM DHTDAKRVRR MLSNRESARR SRRRKQAHLT DLETQVAQLR  240
VENSSLTNRL NDICQKFDEV SVDNRVLKAD VETLRAKVKM AEETVKRVTG QSPMFQTMSE  300
TSTFNTQSYD GDNSDISTDA AVPIQDDRSD HIYQQHASNP LTATPLHDPR VANSLSNNSS  360
TENACPNSSA AETITLSGNK TGRMSSMQRV ASLEHLQKRI RGNSSATQCN GEQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	225	RRSRRRKQ
2	220	225	SRRRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006347748.1	1e-141	PREDICTED: light-inducible protein CPRF2
Swissprot	Q99090	1e-118	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A1S4CER8	1e-140	A0A1S4CER8_TOBAC; light-inducible protein CPRF2-like
STRING	PGSC0003DMT400050096	1e-140	(Solanum tuberosum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	2e-68	bZIP family protein

Link Out ? help Back to Top
Phytozome	Kalax.0119s0040.2.p

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]