PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0119s0040.4.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 413aa    MW: 45051.4 Da    PI: 6.5782
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0119s0040.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.42.4e-16203256359
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                          + kr rr+ +NRe+ArrsR+RK+a +  Le+ v++L  eN++L    ++l++ ++k 
  Kalax.0119s0040.4.p 203 DAKRVRRMLSNRESARRSRRRKQAHLTDLETQVAQLRVENSSLT---NRLNDICQKF 256
                          689****************************************9...6666666654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-12199252No hitNo description
SMARTSM003389.2E-17201265IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.415203266IPR004827Basic-leucine zipper domain
PfamPF001702.1E-13204253IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.31E-12205254No hitNo description
PROSITE patternPS000360208223IPR004827Basic-leucine zipper domain
PfamPF124981.1E-35272402IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MDRVFSVEGI ADHFWSSPPP SQLVNHSNAD ASPSNTTMNR SSSEWAFQLF IQENTHSPAA  60
SKLHDDEDVV EIKDHPAAPP NVPIDSDEYQ AFLKTRLDLA CAAVAMTRAS TGKPQDSSTS  120
TDSGTKALNA SQVRSHVNKK GSGSDSSKRK NKDGPLGNPT LPAKPSKHVV QVKSTTSGSS  180
RELSDDDELE GVTEMTGDMD HTDAKRVRRM LSNRESARRS RRRKQAHLTD LETQVAQLRV  240
ENSSLTNRLN DICQKFDEVS VDNRVLKADV ETLRAKVKMA EETVKRVTGQ SPMFQTMSET  300
STFNTQSYDG DNSDISTDAA VPIQDDRSDH IYQQHASNPL TATPLHDPRV ANSLSNNSST  360
ENACPNSSAA ETITLSGNKT GRMSSMQRVA SLEHLQKRIR GNSSATQCNG EQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1217224RRSRRRKQ
2219224SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006347748.11e-143PREDICTED: light-inducible protein CPRF2
SwissprotQ990901e-120CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLM1BPR91e-141M1BPR9_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000500961e-142(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-70bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]