PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0120s0038.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 442aa    MW: 49942.8 Da    PI: 9.468
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0120s0038.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1383.6e-12150185540
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                          k  rr+++NReAAr+sR+RKka+i++Le+   +L +
  Kalax.0120s0038.1.p 150 KTLRRLAQNREAARKSRLRKKAYIQQLETSRIKLVQ 185
                          7789************************86555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.3E-8146220IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.956148192IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-8148192No hitNo description
SuperFamilySSF579595.69E-8150194No hitNo description
PfamPF001702.2E-9150190IPR004827Basic-leucine zipper domain
PROSITE patternPS000360153168IPR004827Basic-leucine zipper domain
PfamPF141441.3E-26241313IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MAASSSNKVA KNNGINNNST IHHHQLLQHH HHNLEHDARF QPSSASPMMT MMMQTRPPSP  60
SSFHPNLIGN KEERHIEDEA LIPNGFADQS CASGMRPPTL NIFPSLPMHQ NQTSTLKRSL  120
SLISYGRQKL PRGLTSSSEQ EGRLKIPDPK TLRRLAQNRE AARKSRLRKK AYIQQLETSR  180
IKLVQLEQEL HRSRSTYGSS FSGGIVVEHP NLSMGLNLSS DAVVYDMEYG RWLEEHHKLT  240
CELRAAFVEQ LHENELSLYV NNWLAHFDQL IHLKSMVAKT DSFHLISGAW KSPAERCFLW  300
IGGFRPSQII KIILKQIEPL SDNQLMGIYG LQNSTQEGEE ALSNGLESLS QSLSNTIASD  360
SLTSPPNDMS NYMGQMAIAI NKLSTLEGFV RQADNLRQQT IHRLLQVLTV RQTARCFLTI  420
SEYFHSLRAL SSLWLARPRQ E*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009370244.21e-167PREDICTED: transcription factor TGA2.3-like, partial
SwissprotQ52MZ21e-160TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2C9V7M51e-165A0A2C9V7M5_MANES; Uncharacterized protein
STRINGXP_009370244.11e-167(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.11e-132bZIP family protein