PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0139s0004.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 527aa    MW: 58603.3 Da    PI: 7.3451
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0139s0004.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.4e-10229271241
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                          ++ k  rr+++NReAAr+sR+RKka++++Le    + ++Le+e
  Kalax.0139s0004.1.p 229 RDAKTLRRLAQNREAARKSRLRKKAYVQQLESsriRLAQLEQE 271
                          678999************************9633356666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.8E-8224277No hitNo description
SMARTSM003380.0012228281IPR004827Basic-leucine zipper domain
PfamPF001702.3E-7229271IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.921230274IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.34E-7232270No hitNo description
PROSITE patternPS000360235250IPR004827Basic-leucine zipper domain
PfamPF141445.1E-31325400IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MASSAHNNDH PSRQQQEAKQ HGPHHQFSSS GMMMMMQPLH PSSSSSPSLH PKLICAKDDR  60
GGAAYGLGEL DEALFLYLNR QPQHEVAEVH HQKQQQLELE HHHHSIDLQQ QITHDGGMRP  120
TLNIFPSQPM HVEPPSATNQ LVVQVNNKSN ETDPRGLVVV VSGAAQQGEV VSGGSSSKMV  180
SAAEPISTDI LPNSTLILSN TNQGKRTSSN SKRGPASSSE LQITQSQTRD AKTLRRLAQN  240
REAARKSRLR KKAYVQQLES SRIRLAQLEQ EIQRARSQGA HFGGGLILGA EQHLGLSSGI  300
NNFTTDAAIF DMEYARWLEE HHRLMCELRA AIEEHLSENE LQIYVDNCLA HFDEIMNIKS  360
IMAKTDVFHL ISGSWKSPAE RCFMWIGGFR PSQIIKVVMS KIEGLTDEQA VGICGLQRSM  420
EQAEAALSHG LEELNQSLSD AIVYDSLTSP PRDMASYMGQ MAMAASKLSV LEGFVRQADN  480
LRYQAIHRLH QILMTRQTAR GLLLIAEYFH RLRALSSLWL ARPPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018503110.10.0PREDICTED: transcription factor TGA2.3-like
SwissprotQ52MZ21e-177TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A498HYB50.0A0A498HYB5_MALDO; Uncharacterized protein
STRINGXP_009357109.10.0(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-149bZIP family protein